KEGG   Pongo abelii (Sumatran orangutan): 100172206
Entry
100172206         CDS       T01416                                 
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
  KO
K11835  ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12]
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pon01002]
    100172206 (USP4)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pon04121]
    100172206 (USP4)
Enzymes [BR:pon01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100172206 (USP4)
Peptidases and inhibitors [BR:pon01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   100172206 (USP4)
Ubiquitin system [BR:pon04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100172206 (USP4)
SSDB
Motif
Pfam: UCH Ubiquitin_3 DUSP UCH_1 USP7_C2 USP7_ICP0_bdg
Other DBs
NCBI-GeneID: 100172206
NCBI-ProteinID: NP_001125307
Ensembl: ENSPPYG00000013874
UniProt: Q5RCD3
Position
3:92563330..92630485
AA seq 963 aa
MAEGGGCRERPDAETQKSELGALMRTTLQRGAQWYLIDSRWFKQWKKYVGFGSWDMYNVG
EHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRK
VVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERE
ARLWNKYMSNTYEQLSKLDNTVQDAGLYLGQVLVIEPQNEDGTWPRQTLQSKSSTAPSRN
FTTSPKSSASPYSSVSDSLIANGDSTSTCGMHSSGVSRGGSGFSASYNCQEPPSSHIQPG
LCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIK
QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLEL
KDANGRPDVVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLP
LPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIAAENMVVADVYN
HRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASAL
YGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGACNGSRNSCEGED
EEEMEHQEEGKEQLSETEGSGEDEPGSDPSETTQKKIKGQPCPKRLFTFSLVNSYGTADI
NSLAADGKLLKLNSRSTLAMDWDSETRSLYYDEQESEAYEKHVSMLQPQKKKKTTVALRD
CIELFTTMETLGEHDPWYCPNCKKHQQATKKSDLWSLPKILVVHLKRFSYNRYWRDKLDT
VVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDS
NVSLASEDQIVTKAAYVLFYQRRDDEFYKTPSLSSSGSSDGGTRPSSSQQGLGDDEACSM
DTN
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggcggaaggtggaggctgccgtgagcgaccggatgcggagactcagaagtccgagctt
ggagccttaatgaggaccacactccaacgcggggcgcagtggtatcttattgacagccgg
tggttcaagcagtggaagaagtatgtgggctttggcagctgggacatgtataatgtaggt
gaacataacctatttcctggcccaatagacaactctgggctattttcagatcctgagagt
cagaccttgaaagaacacttaattgatgaattggactacgtattggtccccaccgaggcc
tggaataaactactaaactggtacggctgtgtagaaggccagcaacccatcgtcagaaaa
gtcgtggagcatggcctgtttgtcaagcactgcaaagtcgaggtgtatttgctggaactg
aagctctgcgagaacagtgaccccaccaatgtgctgagttgccatttcagcaaggcagac
accattgcaaccatcgagaaagagatgcggaagctgttcaacatccctgcggagcgtgaa
gcacggctctggaacaaatacatgagcaacacctacgagcagttgagcaagctagacaac
actgtccaggatgctgggctatacctgggtcaggtgctggtaattgagcctcaaaatgaa
gatggcacatggcccaggcagaccttgcagtcaaaatcaagcactgcgcctagcagaaat
tttactacctctccaaaatcatcagcaagtccctattcctcagtgtctgactctctcatt
gcaaatggtgatagcactagcacctgtgggatgcacagttccggtgtcagcaggggtgga
tctggcttttctgcttcgtataattgtcaggagccaccatcctctcatatacaacctggg
ctctgtggacttggaaacctgggaaacacctgcttcatgaactctgctttacagtgcttg
agcaacactgcaccactgactgactactttctcaaagatgagtatgaagccgaaatcaac
agagacaaccctctggggatgaaaggggaaattgcagaagcctatgccgaactcattaag
cagatgtggtctggaagggatgcccatgtggcacctcgcatgttcaaaactcaagtggga
cgttttgctcctcaattttctggctaccagcaacaagattctcaggagctgctggccttt
cttctagatggattgcatgaagatctgaaccgagtaaagaaaaagccctacttggagctg
aaggatgccaatgggcggccagacgtggtggtggcaaaggaagcctgggagaatcacagg
ttgaggaatgattctgtgattgtggatactttccatggcctcttcaaatctactttggtt
tgcccagaatgtgctaaggtttctgtgacctttgacccattttgctatctaacgctgcca
ctgcccttgaagaaagatcgagttatggaggttttcctcgttcctgctgaccctcactgc
agacctactcagtaccgtgtgactgtgccgctgatgggggctgtgtccgacctgtgcgag
gctctctccaggctgtctggcattgctgcagaaaatatggtggtcgcagatgtgtataat
caccgattccacaaaattttccaaatggatgaaggtttaaaccacatcatgcctcgggat
gacattttcgtgtatgaggtctgcagcacttccgtggacggctcagaatgtgtcacgctt
ccagtctacttcagggagaggaagtccaggccatcaagcacttcctccgcatcagcgcta
tatgggcagccactgttgctttctgtccccaagcacaagttaacccttgagtctttgtac
caggctgtttgtgatcgtatcagccgctatgtgaaacagcctttacctgatgaatttggc
agctcacccttggagccaggggcctgcaatggctccaggaacagctgtgaaggagaagat
gaggaagaaatggagcatcaggaagaaggcaaagagcagctttcagaaacagaaggcagt
ggggaagatgagccaggaagtgaccccagtgagaccacccaaaagaagatcaaaggccag
ccctgcccaaaaaggctttttaccttcagtcttgtgaactcctatggaacagctgacata
aattcacttgcagctgatggaaaactacttaaactcaactctcgatctacactggccatg
gattgggacagtgaaactcggagcctttactatgatgagcaagaatctgaggcctacgag
aagcatgtgagcatgttgcagcctcagaagaagaagaagaccacagtggccctgagagac
tgcattgagctcttcaccaccatggagacccttggggagcatgacccctggtactgtccc
aactgtaagaagcatcaacaggccacaaaaaagtctgacctatggtccttgcccaagatc
ctggtggtccacctcaaacgtttctcctacaacagatactggagggataagctcgacaca
gtcgtagaattcccaatcagagggctgaacatgtccgagtttgtctgtaacctgtcagca
aggccttatgtgtatgacctcattgccgtgtccaatcattatggagccatgggggttggc
cactacactgcatatgcgaagaacaaactgaatgggaaatggtattactttgatgatagc
aacgtgtccctggcctctgaggatcagatagtgactaaagcagcttatgtgctcttttac
caacgtcgagatgatgaattttataagacaccttcacttagcagttctggttcctctgat
ggagggacacgaccaagcagctctcagcagggcttgggggatgatgaggcttgcagcatg
gacaccaactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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