KEGG   Pongo abelii (Sumatran orangutan): 100172682
Entry
100172682         CDS       T01416                                 
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1
  KO
K17890  autophagy-related protein 16-1
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon04136  Autophagy - other
pon04140  Autophagy - animal
pon04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pon00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100172682 (ATG16L1)
   04136 Autophagy - other
    100172682 (ATG16L1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100172682 (ATG16L1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pon04131]
    100172682 (ATG16L1)
   03029 Mitochondrial biogenesis [BR:pon03029]
    100172682 (ATG16L1)
Membrane trafficking [BR:pon04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    100172682 (ATG16L1)
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    100172682 (ATG16L1)
Mitochondrial biogenesis [BR:pon03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100172682 (ATG16L1)
SSDB
Motif
Pfam: ATG16 WD40 ANAPC4_WD40 eIF2A WD40_like
Other DBs
NCBI-GeneID: 100172682
NCBI-ProteinID: NP_001125757
Ensembl: ENSPPYG00000013289
UniProt: Q5RAC9
Position
2B:120514233..120557872
AA seq 607 aa
MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDVPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
HPGSGKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDSRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKHWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
VFSPDGSYVAAGSAEGSLYTWSVLTGKVEKVLSKQHSSSINAVAWSPSGLHVVSVDKGCK
AVLWAQY
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtcgtcgggcctccgcgccgctgacttcccccgctggaagcgccacatctcggagcaa
ctgaggcgccgggaccggctgcagagacaggcgttcgaggagatcatcctgcagtataac
aaattgctggaaaagtcagatcttcattcagtgttggcccagaaactacaggctgaaaag
catgacgtaccaaacaggcatgagataagtcctggacatgatggcacatggaatgacagt
cagctacaagaaatggcccaactgaggattaagcaccaagaggaactgactgaattacac
aagaaacgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcggaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgtttgcagactatctctgac
ctggagacggagtgcctagacctgcgcactaagctttgtgaccttgaaagagccaaccag
accctgaaggatgaatatgatgccctgcagatcacttttactgccttggagggaaaactg
aggaaaactacggaagagaaccaggagctggtcaccagatggatggctgagaaagcccag
gaagccaatcggcttaacgcagagaatgaaaaagactccaggaggcggcaagcccggctg
cagaaagagcttgcagaagcagcaaaagaacctctaccagtcgaacaggatgatgacatt
gaggtcatcgtggatgaaacctctgatcacacagaagagacctctcctgtgcgagccatc
agcagagcagccactaagcgactctcacagcctgctggaggccttctggattctatcact
aatatctttgggagacgctctgtctcttccttcccagtcccccaggacaatgtggatact
catcctggttctggtaaagaagtgagggtaccaactactgccttgtgtgtgttcgatgca
catgatggggaagtcaatgctgtgcagttcagtccaggttcccggttactggccaccgga
ggcatggaccgcagggttaagctttgggaagtatttggagaaaaatgtgagttcaagggt
tccctatctggcagtaatgcaggaattacaagcattgaatttgatagtgctggatcttac
ctcttagcagcttcaaatgattttgcaagccgaatctggactgtggatgattctcggtta
cggcacacactcacgggacacagtgggaaagtgctgtctgctaagttcctgctggacaat
gcgcggattgtctcaggaagtcacgaccggactctcaaacactgggatctacgcagcaaa
gtctgcataaagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcaa
tgtgtaatgagtggacattttgacaagaaaattcgtttctgggacattcgatcagagagc
atagttcgagagatggagctgttgggaaagattactgccctggacttaaacccagaaagg
actgagctcctgagctgctcccgtgatgacttgctaaaagttatcgatctccgaacaaat
gctatcaagcagacgttcagtgcacctgggttcaagtgtggctctgactggaccagagtt
gtcttcagccctgatggcagttacgtggcggcaggctctgctgagggctctctctatacc
tggagtgtgctcacagggaaagtggaaaaggttctttcaaagcagcacagctcatccatc
aatgcggtggcgtggtcgccctctggcttgcacgttgtcagtgtggacaaaggatgcaaa
gctgtgctgtgggcacagtattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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