KEGG   Pongo abelii (Sumatran orangutan): 100173982
Entry
100173982         CDS       T01416                                 
Symbol
RNF8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8
  KO
K10667  E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pon04121]
    100173982 (RNF8)
   03400 DNA repair and recombination proteins [BR:pon03400]
    100173982 (RNF8)
Enzymes [BR:pon01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100173982 (RNF8)
Ubiquitin system [BR:pon04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100173982 (RNF8)
DNA repair and recombination proteins [BR:pon03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     100173982 (RNF8)
SSDB
Motif
Pfam: FHA zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-rbx1 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 Prok-RING_4 Yop-YscD_cpl zf-ANAPC11 zf-RING_6 zf-RING_10 DUF6594
Other DBs
NCBI-GeneID: 100173982
NCBI-ProteinID: NP_001126963
Ensembl: ENSPPYG00000016561
UniProt: Q5R4I2
Position
6:37704139..37741464
AA seq 486 aa
MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMIS
RNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLSVYSIHQGDYIQLGVPLENKENAEY
EYEVTEEDWETIYPCLSPKNDQVIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKVS
CESGQSVKSQGKGEVSSTPSENLDPKLTVLEPSKKTTGAPIYLGFPKVTEVHHEQTASNS
SASQRGLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKIVQMEQELLDLQSQL
CAEQAQQQARVEQLEKTFQEEEQHLQDLEIAQGEEDLRQQLAQALQEHWALMEELNRSKK
DFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA
HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER
KVKRLF
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgggggagcccggcttcttcgttacaggagaccgcgccggtggccggagctggtgcctg
cggcgggtggggatgagcgccgggtggctgctgctggaagatgggtgcgaggtgactgta
ggacgaggatttggtgtcacataccaactggtatcaaaaatctgccccctgatgatctct
cgaaaccactgtgttttgaagcagaatcctgagggccagtggacaattatggacaacaag
agtctaaatggtgtttggctgaacagagcacgtctggaacctttaagtgtctattccatt
catcagggagactacatccaacttggagtgcctctggaaaataaggagaatgcggagtat
gaatatgaagttactgaagaagactgggagacaatatatccttgtctttcgcccaagaat
gaccaagtgatagaaaaaaataaggaattgagaactaaaaggaaattcagtttggatgaa
ttagcaggtcctggagctgaaggcccctcaaatttgaaatccaaaataaataaagtgtct
tgtgaatctggtcagtcagtgaaatcacaggggaaaggtgaagtgtccagtacaccttct
gaaaatttggatcctaagttgactgtccttgagccaagtaagaagaccacaggggctccc
atttaccttggcttccccaaagtcacagaggttcatcatgagcagacagcctcaaactct
tcagcatctcagagaggcttacagatgtttaaggtgaccatgtccaggattctgaggctg
aaaatacagatgcaggaaaaacatgaagccgttatgaatgtgaaaaagcagacccaaaag
gggaactcaaagaaaattgtgcaaatggagcaggaactgctggacttacagtcccagctg
tgtgcagagcaggctcagcagcaggcaagagtggagcaactagagaagactttccaggaa
gaggaacagcatcttcaggatttggagatagcgcaaggagaagaggacctgaggcaacag
ctggcccaggctctacaggagcattgggctctaatggaagagctaaatcgcagcaagaag
gactttgaagccatcattcaagccaagaacaaagaattagagcagaccaaggaagagaag
gagaaggtgcaagcacagaaggaagaagttctcagccacatgaatgatgtgctagagaat
gagctccaatgtattatttgttcagaatacttcattgaggctgtcaccttgaactgtgcc
cacagtttctgctcctactgtatcaatgaatggatgaagcggaagatagaatgccccatt
tgtcggaaagacattaagtccaaaacgtactctttggttctggacaattgcattaataag
atggtaaataatctgagctcagaagtgaaagaacgacgaattgttctcattagggaacga
aaagtaaagagattgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (36)   

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