KEGG   Pongo abelii (Sumatran orangutan): 100174376
Entry
100174376         CDS       T01416                                 
Symbol
SYMPK
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03015  mRNA surveillance pathway
pon04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100174376 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100174376 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pon03021]
    100174376 (SYMPK)
   03019 Messenger RNA biogenesis [BR:pon03019]
    100174376 (SYMPK)
Transcription machinery [BR:pon03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100174376 (SYMPK)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100174376 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     100174376 (SYMPK)
SSDB
Motif
Pfam: SYMPK_PTA1_N PDS5 Cnd1 Cohesin_HEAT FANCF
Other DBs
NCBI-GeneID: 100174376
NCBI-ProteinID: NP_001127315
UniProt: Q5RC58
Position
19:complement(44078696..44111210)
AA seq 533 aa
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPR
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcgagtggcagtggagacagcgtcacccgtcggagcgtggcatcacagtttttcact
caagaggaggggccgggcatcgatggcatgaccacctcagagagggtggtggatcttctg
aaccaggcggcgctgatcaccaatgactcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaagaccccacactactggacaacttcctggacgagatcatcgcattc
caagcggacaagtcaatcgaagtgcgaaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttgctgctgaaactcattgcaaacctcaacatgctcttgagggac
gagaatgtgaacgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtcattagcgagctacaggaggcctgctgggacatg
gtatccgccatggcgggggacatcatcctgctattggactctgacaatgacggcatccgc
acccacgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggctgac
tcagagataccccgacgccaggagcatgacatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaacgtgctatgggaagagggcaaggcagccttggagcagctgctt
aagttcatggtgcaccctgccatctcctccatcaacctgaccacagcgctgggctccctc
gccaatatcgcccgccagagacccatgttcatgtctgaggtgatccaggcctatgaaact
ctgcatgccaacctgcccccgacgctggccaaatctcaggtgagcagcgtgcgtaagaat
ctgaagctgcacctgttgagtgtgctgaagcacccggcttccttggagttccaggcccag
atcaccaccctgctggtggacctgggcacacctcaggccgagatcgcccgcaacatgccg
agcagcaaggacacccgcaagcggccccgcgatgactcggactccacactcaagaagatg
aagctggagcccaacctgggggaggatgatgaggacaaggacttggagccaggcccatcg
gggacctcgaaggcctcggcacagatctccggccagtcagacacggacatcacagctgag
ttcctgcagcctctgctgacgcctgataatgtggctaatctggtcctcatcagcatggtg
tacctgcccgaggccatgccagcctccttccaggccatctacacccctgtggagtcagca
ggcacggaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgcc
ggactgggaccaggtgtagagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagacggagagtgtcctgatcaagcggcgcctgtcagcccagggccaagccatc
tcggtggtgggttccctgagctccatgtcccctctggaggaagaggcaccgcaggccaag
aggaggccagagcccattatccctgtcactcagccccggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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