KEGG T01416: 100438445

Pongo abelii (Sumatran orangutan): 100438445

Entry

100438445         CDS       T01416

Symbol

MEX3D

Name

(RefSeq) RNA-binding protein MEX3D

K15686

RNA-binding protein MEX3 [EC:2.3.2.27]

Organism

pon Pongo abelii (Sumatran orangutan)

Brite

KEGG Orthology (KO) [BR:pon00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100438445 (MEX3D)
   04121 Ubiquitin system [BR:pon04121]
    100438445 (MEX3D)
Enzymes [BR:pon01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100438445 (MEX3D)
Messenger RNA biogenesis [BR:pon03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100438445 (MEX3D)
Ubiquitin system [BR:pon04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100438445 (MEX3D)

SSDB

Motif

Pfam:

KH_1 zf-C3HC4_3 zf-RING_2 zf-RING_4 zf-C3HC4 Prok-RING_4

Other DBs

NCBI-GeneID:

100438445

NCBI-ProteinID:

XP_009250827

Position

19:complement(1294983..1308066)

AA seq 651 aa
MPSSLGQPDGGGGGGGGGGGAGTAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALR
LALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVSPDGPEAGAPPTLAPAVA
VAPGSLSLLDPNASPPPPPPPRPSPPDVFAGFAPHPAALGPPTLLADQMSVIGSRKKSVN
MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKR
EILSAAEHFSIIRATRSKAGGLPGAAQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKR
IQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDAGPDSDFHANG
TDVCLDLLGAAASLWAKTPNPGRRPPTATAGLRGDTALGAPSAPEAFYAGSRGGPSVPDP
GPASPYSGSGNGGFAFGAEGPGAPVGTAAPDDCDFGFDFLALDLTVPAAATIWAPFERAA
PLPAFSGCSTVNGAPGPPAAGARRSSGAGTPRHSPTLPEPGGLRLELPLSRRGAPDPVGA
LSWRPPQGPVSFPGGAAFSTATSLPSSPAAAACAPLDSGAPENSRKPPSASSAPALAREC
VVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIFS

NT seq 1956 nt +upstreamnt +downstreamnt
atgcccagctcgctcggccagcccgacggcggagggggcgggggcggcggcggcggcggc
gcggggacggcgggggaggaccccggacccggacctgcgcccccgcccgagggcgcccag
gaggccgcgcccgcgccccggccgccgcccgaacccgacgacgcggccgccgcgctccgc
ttggcgctggaccagctgtcggcgctcgggctggggggcgctggcgacacggacgaggag
ggggcggccggggacggtgcagcggcggccgggggcgcggacggcggggcggctccggag
cctgtgtcccccgacggacctgaggccggcgcgcccccgaccctggcccccgccgtggcc
gtggcccccgggtcgctgtcgctgctggaccccaacgcgagtcccccgccgccgccaccg
ccccggccgtcgccccccgacgtgttcgcgggcttcgcgccccaccccgcggccctgggc
cccccgacgctgctggccgaccagatgagcgtgatcggcagccgcaagaaaagcgtcaac
atgaccgagtgcgtcccggtgcccagctccgagcacgtcgccgagatcgtgggtcgccag
ggctgcaagatcaaggccctgcgggccaagacaaacacctacatcaagaccccggtgcgg
ggcgaggagccggtcttcatcgtgacgggccggaaggaggacgtggagatggccaagcgt
gagatcctgtcggcggccgaacacttctccatcatccgcgccacacgcagcaaggccggg
ggtctgcccggtgccgcccagggtccgcccaacctccccggacagaccaccatccaggtg
cgcgtgccctaccgggtggtggggctggtggtggggcccaagggcgccaccatcaagcgc
atccagcagcggacgcacacctacatcgtgacgcccgggcgcgacaaggagccggtgttc
gcggtcactgggatgcccgagaacgtggaccgcgcgcgcgaggagatcgaggcgcacatc
acgctgcgcactggcgccttcaccgacgcgggccccgacagcgacttccacgccaacggc
accgacgtctgcctggacctgctcggggcggccgccagcctctgggccaagacccccaac
ccgggacgacggcctcccacggccacggccggcctccgcggggacacggccctgggcgcc
cccagcgcccccgaggccttctacgcgggcagccgcggcggcccctccgtgccggaccca
ggccccgccagcccctacagcggctccggcaacgggggcttcgccttcggcgcggagggt
cccggtgccccggtggggacggccgcccccgacgactgcgacttcggcttcgacttcctg
gcgctggacctgaccgtgcccgccgcggccaccatctgggcgcctttcgagcgcgccgcc
cccttgcccgccttcagcggctgctccacggtcaacggagccccgggaccacccgccgcc
ggcgcccggcgcagcagtggggccgggaccccccgccactcgcccacgctgcccgagccc
ggcggcctccgcctggagctcccgctgtcccgccgcggcgccccggacccggtgggcgcg
ctgtcctggcgacccccgcagggccccgtatccttcccaggcggcgccgccttctccacg
gccacctcgctgcccagcagccccgcggccgccgcctgcgcccccctggactccggcgcc
cccgagaacagccgcaagcccccttcggcgtcctcggccccggccctggcgcgggagtgc
gtggtgtgcgccgagggcgaggtgatggctgcgctggtcccctgcggccacaacctcttc
tgcatggactgcgccgtccgcatctgcggcaagagcgagcccgagtgtcccgcctgccgc
acgccggccacccaggccattcatatcttttcctag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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