KEGG   Pongo abelii (Sumatran orangutan): 100441435
Entry
100441435         CDS       T01416                                 
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
  KO
K11855  ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pon01002]
    100441435 (USP42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pon04121]
    100441435 (USP42)
Enzymes [BR:pon01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100441435 (USP42)
Peptidases and inhibitors [BR:pon01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   100441435 (USP42)
Ubiquitin system [BR:pon04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100441435 (USP42)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 100441435
NCBI-ProteinID: XP_024105774
Ensembl: ENSPPYG00000017345
Position
7:256678..314098
AA seq 1325 aa
MTIVDKASESSDPSSYQNQPGSSEAVSPGDMDAGSASWGAVSSLSDVSNHTLSLGPVPGA
VVYSSPSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGD
LTHPTHSPGQSSPRPVISQRVVTNKQAAPGFIGPQLPSHMIKNPPHLNGTGPLKDTPSSS
MSSPNGNSSVNRASPVNASASVQNWSVNRSSVIPEHPKKQKITISIHNKLPVRQCQSQPN
LHSNSLENATKPVPSSTITNSAVQSTSNASTMSVSSKVTKPIPRSESCSQPVMNGKSKLN
SSMLVPYGAESSEDSDEESKGLGKENGIGTIVSSHSPGQDAEDEEASPHELQEPVTLNGA
NSADSDSDPKENGLPPDGASCQGQPALHSENPFAKANGLPGKLMPAPLPSLPEDKILETF
KLSNKLKGSTDETSAPGAERGPPEDRDAEPQPGSPAAESLEEPDAAASLSSSKKAPPPPD
PGTPATKEGAWEAMAAASEEPPPSAGQDIAGDTALPDLCDPGSLTGDASPLSQDAKGMIA
EGPRDSALTEAPEGLSPAPPAQSEEPCQQPLVVHPSGDHAWDAQDPSQSSGVPEAAEEPP
APVLDVAPAGHPEGDAEPSPGEMVEDAAAPKAPGPSPAKEKIGSLRKVDRGHYRSRRERS
SSGEPARESRSKTEGHRHRRRRTCPRERDRQDRHAPEHHPGHGDRLSPGERRSLGRYSHH
HSRHRSGAEPDWVRHHYTEGEHGWGREKFYPDRPRWDRCRYYHDRYAAPYAARDWKSFHG
GREHERAGLHERPHKDYNRGRRGCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTAL
VAADNCNLSDRFHEHENGKSRKRRRDSVENSDSHVEKKARRSEQKDPLEEPKAKKHKKSK
KKKKSKDKHRDRDSRHQQDSDLSAVCSDADLHRHKKKKKKKKRHSRKSEDFVKDSELHLP
RVASLETVAQFRRAQGGFPLSGGPPLEGVGPFREKTKHLRMESRDDRCRLFEYGQGKRRY
LELRR
NT seq 3978 nt   +upstreamnt  +downstreamnt
atgaccatagttgacaaagcttctgaatcttcagacccatcatcctatcagaatcagcct
ggcagctctgaggcagtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcattgagtgatgtgtcaaatcacacactttctttaggaccggtacctggcgct
gtagtttattcgagtccatctgtacctgataaatcaaaaccatcaccacagaaggatcaa
gccctaggtgatggcatcgctcctccacagaaagttcttttcccatctgagaagatttgt
cttaagtggcaacaaactcatagagttggagctgggctccagaatttgggcaatacctgt
tttgccaatgcagcactgcagtgtttaacctacacaccacctctcgccaattacatgcta
tcacatgaacactccaaaacatgtcatgcagaaggcttttgtatgatgtgtacaatgcaa
gcacatattacccaggcactcagtaatcctggggacgttattaaaccaatgtttgtcatc
aatgagatgcggcgtatagctaggcacttccgttttggaaaccaagaagatgcccatgaa
ttccttcagtacactgttgatgctatgcaaaaagcatgcttgaatggcagcaataaatta
gacagacacacccaggccaccactcttgtttgtcagatatttggaggatacctaagatct
agagtcaaatgtttaaattgcaagggcgtttcagatacttttgatccgtatcttgatata
acattggagataaaggctgctcagagtgttaacaaggcattggagcagtttgtgaagccg
gaacagcttgatggagaaaactcatacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatccatagatcctctaatgttcttacactttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaataccctgagtatctcgatatt
cggccatatatgtctcaacccaacggagagccgattgtctatgtcttgtatgcagtgcta
gtccacactggttttaattgccatgctggccattacttctgctacataaaagctagcaat
ggcctctggtatcaaatgaatgactccattgtatctaccagtgacattagatcggtactc
agccaacaagcctacgtgctcttttatatcaggtcccatgatgtgaaaaatggaggtgac
cttactcatcccacccatagccccggccagtcctctccccgccccgtcatcagtcagcgg
gttgtcacgaacaaacaggctgcgccaggctttattggaccacagcttccctctcacatg
ataaagaatccacctcacttaaatgggactggaccattgaaagacacgccaagcagttcc
atgtcgagtcctaacgggaattccagtgtcaacagggctagtcctgttaatgcttcagct
tctgtccaaaactggtcagttaataggtcctcagtgatcccagaacatcctaagaaacaa
aaaattacaatcagtattcacaacaagttgcctgttcgccagtgtcagtctcagcctaac
cttcatagcaattctttggagaacgctaccaagcccgttccctcttctaccattaccaat
tctgcagtacagtctacctcgaatgcatctacgatgtcagtttctagtaaagtaacaaaa
ccgatcccccgcagtgaatcctgctcccagcctgtgatgaatggcaaatccaagctgaac
tccagcatgctggtcccctatggcgccgagtcctctgaggactctgatgaggagtcgaag
gggctgggcaaggagaatgggattggtacgattgtgagctcccactctccgggccaagat
gccgaagatgaggaggcctctccgcacgagctccaagaacccgtgaccctaaacggtgct
aatagtgcagacagcgacagtgacccaaaagaaaatggcctgccgcctgatggtgccagc
tgccaaggccagcctgccctgcactcagaaaatccctttgctaaggcaaacggtcttcct
ggaaagttgatgcctgctcctttgccgtctctcccagaagacaaaatcttagagaccttc
aagcttagcaacaaactgaaaggctcgacggatgaaacgagtgcacctggagcagagagg
ggccctcccgaggaccgcgacgccgagccccagcctggcagccccgccgccgaatccctg
gaggagccagatgcggccgccagcctcagcagcagcaagaaggctccgccgccccccgat
cccggcacccccgctaccaaagaaggcgcctgggaggccatggcagccgcctccgaggag
cctccgcccagcgccggccaggacatcgcgggggacacagcactccctgacctgtgtgat
cccgggagcttaacaggcgacgcgagcccgctgtcccaggacgcaaaggggatgatcgcg
gagggcccgcgggactcggcgttgacggaagccccggaggggttgagtccggctccgcct
gcgcagtcggaggagccctgccagcagccactcgttgttcaccccagcggggaccacgcc
tgggacgctcaggacccatcccagagctcgggcgtgcccgaggccgcagaggagccgccg
gctcctgtgctggacgtggccccggccggtcacccagaaggggacgctgagcctagcccg
ggcgagatggtcgaggacgccgcggcgccgaaagccccaggcccttctccagcaaaggag
aaaatcggcagcctcagaaaggtggaccgaggccactaccgcagccggagagagcgctcg
tccagcggggagcccgccagagagagcaggagcaagactgagggccaccgtcaccggcgg
cgccgcacctgcccccgggagcgcgaccgccaggatcgccacgccccggagcaccacccc
ggccacggcgacaggctcagccccggcgagcgccgctctctgggcaggtacagtcaccac
cactcccgacaccggagcggggcggagccggactgggtcagacaccactacaccgagggc
gagcatggctggggccgggagaagttctaccccgacaggccgcgctgggacaggtgccgg
tactaccatgacaggtacgccgccccgtatgctgcccgggactggaagtccttccacggc
ggccgcgagcacgagcgggccgggctgcacgagcggccgcacaaggactacaaccggggc
cgtaggggctgcgagccggcccgggagagggagcggcaccgccccagcagcccccgcgca
ggcgcgccccacgctctcgccccgcaccccgaccgcttctcccacgacagaactgcactt
gtagccgcagacaactgtaatctctctgatcggtttcacgaacacgaaaatggaaagtcc
cggaaacggagacgcgacagtgtggagaacagtgacagtcatgtcgaaaagaaagcccgg
aggagcgaacagaaggatcctctagaagagcctaaagcgaagaagcacaaaaaatcaaag
aagaaaaagaaatccaaagacaaacaccgagaccgcgactccaggcatcagcaggactca
gacctctcagcagtgtgctctgacgctgacctccacagacacaaaaaaaagaagaagaaa
aagaagagacattcaagaaaatcagaggactttgttaaagattcagaactgcacttaccc
agggtcgcaagcttggagactgtcgcccagttccggagagcccagggtggctttcctctc
tctggtggcccgcctctggaaggcgtcggacctttccgtgagaaaacgaaacacttacgg
atggaaagcagggatgacaggtgtcgtctctttgagtatggccagggtaagaggagatac
ttggaattaagaagatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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