KEGG   Pongo abelii (Sumatran orangutan): 100446173
Entry
100446173         CDS       T01416                                 
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
  KO
K17908  autophagy-related protein 18
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon04136  Autophagy - other
pon04140  Autophagy - animal
pon05010  Alzheimer disease
pon05014  Amyotrophic lateral sclerosis
pon05016  Huntington disease
pon05017  Spinocerebellar ataxia
pon05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pon00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100446173 (WIPI1)
   04136 Autophagy - other
    100446173 (WIPI1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100446173 (WIPI1)
   05014 Amyotrophic lateral sclerosis
    100446173 (WIPI1)
   05016 Huntington disease
    100446173 (WIPI1)
   05017 Spinocerebellar ataxia
    100446173 (WIPI1)
   05022 Pathways of neurodegeneration - multiple diseases
    100446173 (WIPI1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pon04131]
    100446173 (WIPI1)
   03029 Mitochondrial biogenesis [BR:pon03029]
    100446173 (WIPI1)
Membrane trafficking [BR:pon04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    100446173 (WIPI1)
Mitochondrial biogenesis [BR:pon03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100446173 (WIPI1)
SSDB
Motif
Pfam: PROPPIN WD40 ANAPC4_WD40 DUF5711 BCAS3_WD40
Other DBs
NCBI-GeneID: 100446173
NCBI-ProteinID: XP_024090524
Position
17:complement(60996944..61034251)
AA seq 446 aa
MEAEAADAPPGGAESALTCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPANPTGLCALSINHSNSYLAYPGSLTSGEIVLYDGNSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWSGYMGKMFMAATNYLPTQVSDMMHQ
DRAFATARLNFSGQRNICTLSTIQKLPRLLVASSNGHLYMYNLDPQDGGECVLIKTHSLL
GSGTTEENKENDLRPSLPQSYAATVARPSASSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGNQKGKTKQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaggccgaggccgctgacgctcccccgggcggggctgagtcggcgctcacctgcttc
tctttcaaccaggactgcacatccctagcaattggaactaaagccgggtataagctgttt
tctctgagttctgtggagcagctggatcaagtccacggaagcaatgaaatcccggacgtc
tacatcgtggagcgcctcttctccagcagcctggtggtggtggtcagtcacacaaaacca
cggcagatgaacgtgtatcacttcaagaaaggcacagagatctgtaattacagctactcc
agcaacatcttgtccataaggctgaaccggcaaaggctgctggtttgcctagaagagtcc
atttatattcacaacattaaagacatgaagctgttgaagaccctcctggatattcctgca
aacccaacaggtctatgtgctctttctatcaaccattccaattcttacttggcctatcct
ggaagcctgacttcaggggagattgtgctttatgatggaaactccctgaaaacagtctgc
actattgctgcccatgaggggacactagctgccatcaccttcaatgcctcaggctccaaa
ctagcaagtgcgtctgaaaaaggcacagtcatccgggtgttctctgtccctgatgggcaa
aagctctatgagttccggagagggatgaaaaggtatgtgacaatcagctctctagtgttc
agtatggattcacaattcctctgcgcctccagtaacactgagacagtacacatcttcaag
ctggaacaggtcaccaacagtagaccagaagagccttcgacctggagtggctacatggga
aagatgttcatggctgctaccaactacctccccacccaggtgtcagacatgatgcatcag
gacagggcttttgccaccgcacgcttgaacttctccggacagaggaacatctgtaccctc
tcaacgatccagaagttgccacggctgctagttgcatcatccaatggacacctttatatg
tacaatttggatcctcaggatggaggagagtgtgtcttaatcaaaacccacagcttgctt
ggctcaggaacaacagaagagaataaagaaaatgacctcagaccttccttacctcagtct
tatgcagcaaccgtagccagaccaagtgcatcttcagcctccacggtgccaggttattcc
gaggacggcggggcgctgcgaggagaagttattcctgaacatgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgagtttcctcctataatcttgtgccgtggaaatcagaag
ggcaaaacgaagcagtcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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