KEGG   Pongo abelii (Sumatran orangutan): 100450568
Entry
100450568         CDS       T01416                                 
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
  KO
K09098  neuronal PAS domain-containing protein 1/3
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pon03000]
    100450568 (NPAS1)
Transcription factors [BR:pon03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    100450568 (NPAS1)
SSDB
Motif
Pfam: PAS_3 bHLH_HIF1A PAS_11 PAS PAS_4 HLH bHLH_NPAS4
Other DBs
NCBI-GeneID: 100450568
NCBI-ProteinID: XP_054396736
Ensembl: ENSPPYG00000010165
Position
20:53135517..53161459
AA seq 629 aa
MAAPYPGSGGGSEVKCVGGRGASVPWDFLPGLMVKAPSGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLG
GFCSPSLSLFNCQMGARDWEDFVNSALNKALAVLLVTAPGRRGPAALVSEVFEQHLGGHI
LQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEMTGSSVFDYIHPGDHSEVLEQLGLRT
PTPGPPTPPSVSSSSSSSSSLADTPEIEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHV
KASGYKQVIHVTGRLRAHALGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESR
VSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHVDLLDKGQVMTGYYRWLRRAGGFVWLQ
SVATVAGSGKSPGEHHVLWVSHVLSQAEGGQTPLDAFQLPASMACEEASSPGPEPTEPEP
PTEGKQAAPAENEAPQTQGKRIKVEPGPRETKGSEDSGDEDPSGHPATPRPEFTSVIRAG
VLKQDPVRPWGLAPPGDPPPTLLHAGFLPPVVRGLCTPGAIRYGPAELGLVYPHLQRLGP
GPALPEAFYPPLGLPYPGPAGTRLPRKGD
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggcggccccctatcccggcagtggcggcggaagcgaggtcaaatgcgtgggaggccgc
ggcgccagcgtcccctgggactttctacccgggctgatggtcaaggcgccgtccggaccg
tgcctgcaggcgcagcgcaaggagaagtcccggaacgcggcgcgttcgcggcgcgggaag
gagaacctggagttcttcgagctggccaagcttctcccgctgcccggcgccatctccagc
cagctggacaaggcttccatcgtgcgcctcagcgtcacctacctccgcctgcgccgtttc
gccgcgctgggggcgccgccctgggggctgagagccgcggggccgccagctggcctcggt
ggcttctgctctccaagcctcagtttattcaactgtcaaatgggcgcaagagattgggaa
gatttcgtgaattctgccctaaacaaggccctggcagttctattggtcactgccccaggc
cgccgcggccccgcagcgctggtctccgaagtcttcgagcagcacctgggaggtcacatc
ttgcagtccctggatggctttgtgttcgccttgaaccaggaaggaaaattcctctacatc
tcagagacagtctccatctatctgggtctctcacaggtggagatgacgggcagcagcgtc
ttcgactacattcaccctggggaccactcagaggtgctggagcaactggggctgcggacc
ccgacccccggccccccaaccccgccctccgtctcctcttcctcctcctcttcctcttcg
cttgcagatacccccgagatcgaggccagcctcaccaaggtgcccccctcctccctggtc
caggagcgctccttctttgtccgcatgaaatccacgctcaccaagagggggctgcacgtc
aaggcctcggggtacaagcaggtcatccacgtgactgggcgccttcgggcccacgccctg
ggccttgtggccctcgggcacacgttgcccccggcccccctggctgagctgccactccac
ggacacatgatcgtcttccgtctcagcctgggtctcaccatccttgcttgtgagagcaga
gtcagcgaccacatggacctggggccctcagagctggtgggccgcagctgctaccagttc
gtccacggacaggacgccaccaggatccgccagagtcatgtggacttgctggacaagggt
caggtgatgactggttactaccgttggctgcggcgtgccgggggcttcgtgtggctgcag
tctgtggccacggtggctgggagcgggaagagccccggggagcaccatgtgctttgggtc
agccacgtgctcagccaagccgagggtggtcaaactcctttggatgccttccagcttcca
gccagcatggcctgtgaggaggcatccagcccggggccagagcccacagagccggagcct
ccgacggaagggaagcaggctgccccggcggagaacgaggccccccagacccagggcaaa
cgcatcaaagtggagcccggcccgagggaaaccaaaggctctgaggacagtggcgacgag
gatccctctggccacccggccacaccgcggcccgagttcacctctgtcatccgggcaggg
gtcctgaagcaggacccggtgcggccatggggcctggcgcctcccggggaccccccgccc
accctcctgcacgcgggcttcctgccgccggtggtgcggggcctgtgcacgcccggtgcc
atccgctacggccccgcggagctgggtctggtgtacccgcacctgcagaggctgggtcca
ggccccgcgctcccggaggccttttacccgcccctgggcctgccctacccggggcccgcg
ggcaccaggctgccgcggaagggggactga

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (20)   
   RefSeq(pep) (20)   
DNA sequence (20)   
   RefSeq(nuc) (20)   
Protein domain (7)   
   Pfam (7)   
All databases (51)   

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