KEGG   Pongo abelii (Sumatran orangutan): 100456477
Entry
100456477         CDS       T01416                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR beta 5 chain isoform X1
  KO
K06752  MHC class II antigen
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon04145  Phagosome
pon04514  Cell adhesion molecules
pon04612  Antigen processing and presentation
pon04640  Hematopoietic cell lineage
pon04658  Th1 and Th2 cell differentiation
pon04659  Th17 cell differentiation
pon04672  Intestinal immune network for IgA production
pon04940  Type I diabetes mellitus
pon05140  Leishmaniasis
pon05145  Toxoplasmosis
pon05150  Staphylococcus aureus infection
pon05152  Tuberculosis
pon05164  Influenza A
pon05166  Human T-cell leukemia virus 1 infection
pon05168  Herpes simplex virus 1 infection
pon05169  Epstein-Barr virus infection
pon05310  Asthma
pon05320  Autoimmune thyroid disease
pon05321  Inflammatory bowel disease
pon05322  Systemic lupus erythematosus
pon05323  Rheumatoid arthritis
pon05330  Allograft rejection
pon05332  Graft-versus-host disease
pon05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:pon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100456477
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100456477
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100456477
   04612 Antigen processing and presentation
    100456477
   04658 Th1 and Th2 cell differentiation
    100456477
   04659 Th17 cell differentiation
    100456477
   04672 Intestinal immune network for IgA production
    100456477
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100456477
   05164 Influenza A
    100456477
   05168 Herpes simplex virus 1 infection
    100456477
   05169 Epstein-Barr virus infection
    100456477
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100456477
   05152 Tuberculosis
    100456477
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100456477
   05140 Leishmaniasis
    100456477
  09163 Immune disease
   05310 Asthma
    100456477
   05322 Systemic lupus erythematosus
    100456477
   05323 Rheumatoid arthritis
    100456477
   05320 Autoimmune thyroid disease
    100456477
   05321 Inflammatory bowel disease
    100456477
   05330 Allograft rejection
    100456477
   05332 Graft-versus-host disease
    100456477
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100456477
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100456477
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pon04147]
    100456477
Exosome [BR:pon04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100456477
  Exosomal proteins of epithelial cells
   100456477
  Exosomal proteins of breast milk
   100456477
SSDB
Motif
Pfam: MHC_II_beta C1-set ig Ig_3 Ig_2 C2-set_2 DUF202
Other DBs
NCBI-GeneID: 100456477
NCBI-ProteinID: XP_003776854
Position
Unknown
AA seq 266 aa
MVCLKLPGGSYMAALTVTLMVLSSPLALAGDTRSRFLRQDKYECHFFNGTERVRFLHRGI
YNQEENVRFDSDVGEYRAVTELGRPDAEYWNSQKDFLEDRRAAVDTFCRHNYGVVESFTV
QRRVEPKVTVYPAKTQTLQHHNLLVCSVNGFYPDSIEVRWFRNGQEEKTGVVSTGLIQNG
DWTFQILVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLL
FLGTGLFIYFRNQKGHSGLQPTGLVS
NT seq 801 nt   +upstreamnt  +downstreamnt
atggtatgtctgaagctccctggaggttcctacatggcagcgctgacagtgacactgatg
gtgctgagctccccactggctttggctggggacacccgatcacgtttcttgagacaggat
aagtatgagtgtcatttcttcaacgggaccgagcgggtgcggttcctgcacagaggcatc
tataaccaagaagagaacgtgcgcttcgacagcgacgtgggggagtaccgggcggtgacg
gagctggggcggcctgacgccgagtactggaacagccagaaggacttcctggaagacagg
cgggccgcggtggacaccttctgcagacacaactacggggttgtggagagcttcacagtg
cagcggcgagttgagcctaaggtgactgtgtatcctgcaaagacccagaccctgcagcac
cacaacctcctggtctgctctgtgaatggtttctatccagacagcattgaagtcaggtgg
ttccggaacggccaggaagagaagactggggtggtgtccacaggcctgatccagaatgga
gactggactttccagattctggtgatgctggaaacagttcctcggagtggagaggtttac
acctgccaagtggagcacccaagcgtgacgagccctctcacagtggaatggagagcacgg
tctgaatctgcacagagcaagatgctgagtggagtcgggggctttgtgctgggcctgctc
ttccttgggaccgggctgttcatctacttcaggaatcagaaagggcactctggacttcag
ccaacaggactcgtgagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system