KEGG   Populus trichocarpa (black cottonwood): 18095321
Entry
18095321          CDS       T01077                                 
Name
(RefSeq) nuclear pore complex protein GP210
  KO
K14314  nuclear pore complex protein Nup210
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    18095321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    18095321
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     18095321
SSDB
Motif
Pfam: Big_2
Other DBs
NCBI-GeneID: 18095321
NCBI-ProteinID: XP_006369932
Position
1:complement(35592385..35612893)
AA seq 1948 aa
MKVLRFAAFLVAFTTLIVVGKTTSHLSPGPHVTDVNILLPPKMTRPVEYRLQGSDGCFKW
SWDHHDILSVIPEYNLSYSHCSTSARLRSIAPFTGRKETAIYAADVHTGIVIRCKVFIDN
ISRIQIFHNSIKLDLDGLATLRARAFDREDNVFSSLAGLQFMWQLMPETDGLPHHLVHVP
LRDSPLSDCGGLCGDLNIQIELEDSGVFSDLYVVKGVEIGHENVSVHLLEPQFKHLADKI
VLTVAEAMSLEPPSPVLVLIGAAFRYTLKVIRGNILQVVALPSPHHRWSVLNSSVAEVDH
LSGFAQALSLGVTSVIVKDTRVAGHMQVSSLNVVLPDTLCLFIMPLPVSGDPVDGLKAIP
SLARWFVVSGRQYIIQMKVFLGGPDAQEIYITESDDLKLHHEQSEYWTIFMLSEDIVVKH
GWRNSRILRAISLGQGKLTASLTYFSGHRERKKVLSAAQEIMVCDQVKFSLDGASGTHQT
ILLPWTPTIYQEVELKATGGCAKTSSDYKWFSSDTSTVSISPFGVLQAKKPGKATVRVVS
IFDSSNHDEVVIEVSVPSSMIMLQNFPVETVVRSHLPAAVTMKASDGSYYYTCDAFHLFV
KWKVGSESFVIVNATEEARIAEKLGAFHLYESVYGPPCSWAYIYASGPGQTMLQATLSKE
HHLDQSFHGSIILKASSRIAAYPPLTVHQVVDGSQFGGYWLDLGHVEASNHLEPLESLYL
VPGTSLDIMLLGGPAPWDKDVDYLETVEISGDKHASSKDGIHARRISGSYQSMYRVSCQT
LGIFDLVFKRGNLVGDDHSLPAIAEVALSLTCSFPSSIALIVDEPVNRHDAIRFASLADR
STGQIRTTPVTVANGQTIRVAAVGIGVSGEAFANSSSLSLRWELSSCEGLAYWWADAYES
QRLKSSWERFLVLQNESGECIVRATVIGLDDALGSHYLAQLRSLENVLTDAVKLQLVSSL
RVNPEFNLLYFNPDAKVNLSIAGGSCLWEAVVNDSQVVEVAQPPPGLQCFQLRLLPKMLG
TALVSISDIGLIPPTSASAVVQVADVDWIKIVSGEQISLMEGQSQPIHLMAGIKDGNAFD
SNQYAYMKIHVHIEDPIVELVDKNGMPSDAGGYVNAPNFTINAKDLGFTTLYVSVRQQSG
HEILSQSIKIEVYAPLRIHPDDIFLVPGACYMLAMKGGPTVGVYIQYASMDDGIATVDKS
SGRLCAISPGNTTILSSVFGNGGVVVCQAHGSIYVGVPSLSMLSAQSDKLDVGREMPIYP
SFPEGDLFSFYELCRSYKWTIEDEKVLSFNMAESSNVEKHWFPLDDEQELDFIKVLHGRS
AGKANITVTFSCDFVSASFSQSRLYDASLSLLVVPPLPLALGVPMTWLLPPHYVTSSLLP
SSLESHGQQDAQSRRGTIIYSLLSCEKNEVWKKNAISIDGDRIKTTESNNLACIQAKDRT
TGRTEIASCVKVAEVAQIRIMNRDPPFHVIYLAVGANLDLPISYFDASGNPFYEAYDVIS
YHAETNYHEIVSVVHTRNGNGTIHLKAMQTGRALVRVSMNSNPRKFDYILVSVGAHIYPQ
NPVLQHGSSLNLSVIGINDQVSGCWHSADERVVSVDMRSGKIEACGIGSTHVFFKCPSMK
LQTEITVLSGNIVSIHAPKEILTNIPYPAKGYSFPLSLSDTYNKLETLGNSKGVSYDCKV
DPPFVGYAKPWMDLESGNSYCLFFPYSPEHLVHSVPRLKDMRPYVSISINVSLREASHVS
GSASAIFIGGFSILEMDKSPMQLNLTPDSNKTTITILGNTDVEIHWLDRDSMKIALVHKE
DFGIGSHAQYEVEVLRAKRLKDRITITLPANGQRMEIQVTYEPDAKTGAKTSFATFIGLL
VAGCVILCVIYLGCSLLISEISSIHVPSTTPATPPSAAPQTPARGSPVLTEQSPRTPQPF
VDYVRKTIDETPYYKREVRRRSNPQNTY
NT seq 5847 nt   +upstreamnt  +downstreamnt
atgaaggtgctgcgttttgctgcgtttttggtagctttcactactctcattgtcgtcggc
aaaacgacgtcacatttgagccccggacctcacgtcaccgatgtcaatattctgttgcct
cctaaaatgacgcgtcccgtcgagtatcgcctccaaggaagtgatggctgctttaaatgg
tcatgggatcatcacgatattctatcagttatacctgagtataatttaagctacagccac
tgttcaaccagtgcacggttgagatcaattgctccctttaccggtcggaaggagacagct
atttatgctgctgatgtacacactggcattgtgattcgctgcaaggtctttattgacaat
atttccagaatccagatatttcacaattctattaaacttgatttagatggtcttgctact
ctccgagctcgcgccttcgatcgtgaagataatgtgttttcgtcattagctggattacaa
ttcatgtggcagctgatgcctgaaacggatggattgccgcaccaccttgtccatgttcct
ctcagggattctccgctcagtgattgtggtggtttatgtggtgatttgaacatccaaata
gaacttgaagatagtggtgtattctcggatttgtatgttgtgaaaggagtcgaaattggc
catgagaatgtttcggtgcatttgcttgagccacaatttaagcacttggctgataagatt
gttctaactgtggcagaagccatgtcacttgaacctccctcacctgttttggtcctcatt
ggtgctgcctttcgatatacgctcaaagtcattcgtgggaatattctgcaagtggttgct
cttccatctccacatcataggtggtctgttttgaactcttcggttgctgaagtggaccac
ttgtcaggctttgctcaggcactgagcttaggggtaacatctgtcattgtcaaagatact
agagttgctggccatatgcaagtttcatcacttaatgtggttctacctgacactttgtgc
ttatttataatgcccttgcctgtttctggtgatcctgttgatggattgaaagccattcca
tccttggcacgttggtttgttgtttctggtcgtcaatatattattcaaatgaaggttttc
ttggggggacctgatgcgcaagaaatctatattacagagagtgatgaccttaagttgcac
catgagcagtctgaatactggacaattttcatgttatcagaggatattgtggtcaaacat
ggctggcgaaattccagaattctgagagcaatttcccttggtcaaggaaaactaacagct
tctttaacttattttagtgggcaccgggagagaaaaaaggttcttagcgccgcgcaagaa
attatggtatgtgatcaagtgaagttcagtttggatggagcaagcggtacacatcagact
attcttcttccctggactcctactatttaccaggaggtggagctaaaggcaacaggaggc
tgtgcaaaaacatccagtgattataaatggttttcttcagacacgtctactgtgtcaata
tctccatttggggtacttcaggcaaaaaagcctggtaaagcgactgtcagagtagtgtcc
atttttgattcttctaatcatgacgaggtggtcattgaagtttctgtaccatcatctatg
attatgcttcaaaacttccctgtagagactgttgtaagatcacatcttccagctgccgta
acaatgaaagcatcagatggttcctattattatacatgtgatgcttttcatctattcgta
aaatggaaagttggaagtgagtctttcgtcattgtcaatgcaacagaggaggcacgtatt
gcagaaaaactgggggcttttcacctctatgaatcagtttatggtccaccatgttcatgg
gcctatatatatgcttccggtcctgggcagaccatgctgcaggcaacattgtcgaaagaa
catcacttggatcaatcgtttcatgggtccattattttgaaggcatcatcacgtattgca
gcatacccaccacttacagtgcatcaggtagtagatggaagccaatttggtgggtattgg
cttgatttgggtcatgttgaagcaagcaatcacctggagcctttggagagcttgtatctt
gtccctggaacaagtttagatatcatgcttcttggtggaccagcaccatgggacaaagat
gttgactatcttgaaactgtggaaatatcaggtgacaagcatgcttccagtaaagatgga
attcatgcacgtcggatttctggcagctatcagagtatgtacagagtttcatgccaaact
ctggggatatttgatttggttttcaaacgcgggaatttggttggagatgaccactctctg
cctgcaatagcagaagttgctttgtctcttacatgcagctttccatcttcaattgcactt
atcgttgatgaacccgttaacagacatgatgccataaggttcgcatctcttgctgatcgt
agcacagggcaaatccgcaccacccctgttactgtggcaaatgggcaaactattagggtg
gctgcagttggcataggtgtttctggagaagcttttgcaaactcatcttctctttctctg
aggtgggagttgagcagctgtgaaggactggcatattggtgggctgatgcttatgagtcg
cagagattgaaatccagctgggagaggttcttagtcttgcaaaatgaatcaggagaatgt
attgttcgtgccactgttattggtcttgatgatgccctcggtagtcattatttggctcag
ttgcgaagtctagagaatgttcttacagatgctgtaaagttgcagcttgtttcttctttg
agagtgaatccagagttcaacttgttgtatttcaatcccgatgctaaggtaaatctttca
attgctggagggagctgtttatgggaagctgttgtgaatgattctcaagtggtagaagtt
gctcagcccccaccaggcttacaatgctttcagttgaggctccttcctaaaatgttgggg
actgcacttgtgtcaatatctgatattgggcttattcctcctacttcagcttctgctgtg
gttcaagttgctgatgtggactggattaaaatagtatcaggagaacaaataagtctcatg
gaaggacagtcacagcccatacatttaatggctgggattaaggatgggaatgcttttgac
tctaatcagtatgcgtacatgaaaattcatgtacacatcgaggatcctatagttgaactt
gttgacaagaatggtatgcctagtgatgccggtggatatgttaatgctccaaactttacg
atcaatgctaaagatcttggattcacaacactttatgttagtgttagacagcaatctgga
catgaaatattgagtcaatcaataaagatagaagtatatgcgcccctgagaattcatcca
gatgatattttcctggtaccaggtgcttgttacatgcttgctatgaaagggggcccaaca
gttggcgtatatattcagtatgcttcaatggatgatggaatagcaacagtggacaaatct
tcaggacgactttgtgcaatttctcctggaaacactacaatcctttcctcggtgtttggg
aatggaggtgttgtggtatgtcaagcacatggtagcatttatgttggagttccttctttg
tcaatgttgagtgcacaaagcgataagcttgatgtcggccgtgagatgccgatatatcca
tcatttcctgagggtgatttattttcattttatgagctctgcagaagttacaagtggacc
atagaggatgaaaaggtgttgagtttcaacatggcagaaagctcaaatgttgaaaagcac
tggttcccattggatgatgagcaggaacttgattttattaaagtcttgcatggaagatct
gcaggcaaggcaaatatcacagttacattctcttgtgatttcgtttccgcttcgttctca
cagtcgaggctatatgatgcttctttatcactattggttgtgcctcctctccctcttgct
cttggagttccaatgacatggcttcttcctcctcattatgttacatctagccttttgcct
tcatctttggaatcgcatggtcaacaagatgctcagagtcgtagaggaacaattatctat
tcgttattaagttgtgaaaagaatgaagtttggaaaaaaaatgcaatttctatagatgga
gatagaataaaaacaactgagagtaacaatcttgcatgcatacaagccaaagatcgaacc
actggaagaactgagattgcatcttgtgtcaaggtcgctgaggtggctcaaataagaata
atgaatagggacccccctttccatgtaatttatctcgctgttggtgccaaccttgatctt
ccaataagctattttgatgcttcagggaatcccttttatgaagcatatgatgtcatttcc
tatcatgctgaaaccaactatcatgaaattgtctccgttgtgcatacaagaaatggcaat
gggactatccatctgaaggcaatgcaaactggtagagctctggtgcgagtatcaatgaac
agtaatccacgaaaatttgactatatactggtttcagttggtgctcacatatatccccaa
aaccctgtccttcaacatgggagttctcttaacctcagtgtaataggcattaatgatcaa
gtttctggctgctggcatagcgctgatgaaagagttgtttctgtagacatgcgatctgga
aaaattgaagcatgtggaataggttcaacccatgtatttttcaaatgcccaagcatgaaa
ttgcaaacagaaatcacagtgctatcaggaaatattgtttctattcatgccccaaaagag
atcctaacaaacattccttacccagcaaaaggatatagcttccctttgagcttaagtgat
acttacaacaagcttgaaactcttggaaacagtaagggagtatcatatgactgcaaggtt
gatcctccttttgtggggtatgcaaagccatggatggatcttgaatctgggaattcctat
tgcctgttcttcccatattcaccagagcacttggtgcattctgtacccaggttgaaggac
atgagaccatatgtatctatttctataaacgtatcactcagagaagccagccatgtctct
ggatctgcatcagcaatttttattggagggttttcaatattagaaatggacaagagtcca
atgcaactgaacctgacaccagattccaacaagactactataaccatcttgggaaataca
gatgttgaaatccactggcttgatcgggattcaatgaagatcgctcttgtccacaaggaa
gatttcgggataggtagccatgcacaatatgaggtcgaagtgttgagagccaaaagattg
aaagatagaatcaccatcactctcccagccaatggtcagagaatggaaatacaagttact
tatgaacctgatgcaaaaacgggggcaaaaactagctttgcaaccttcattgggctacta
gtagctggatgtgtgatcctttgtgtaatttatctaggctgttccttgcttatctctgag
atatccagcatacatgtgccctctaccacccctgccactccacctagcgcagcaccacag
acacctgctcgtggcagtcctgtcttgactgaacagtcgcctcgaacacctcagccattt
gtagattatgtaaggaagacaatagatgaaactccctactacaagcgagaagttaggagg
aggtctaatccacagaatacttactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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