KEGG   Populus trichocarpa (black cottonwood): 18096512
Entry
18096512          CDS       T01077                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 2, chloroplastic isoform X2
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pop01002]
    18096512
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pop03110]
    18096512
Peptidases and inhibitors [BR:pop01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   18096512
Chaperones and folding catalysts [BR:pop03110]
 Other chaperones and cochaperones
  AAA proteases
   18096512
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext TIP49 AAA_5 AAA_16 AAA_17 RuvB_N nSTAND3 AAA_22 Mg_chelatase AAA_28 IstB_IS21 AAA_33 LonB_AAA-LID AAA_2 AAA_18 AAA_7 Parvo_NS1 AAA_14 ABC_tran
Other DBs
NCBI-GeneID: 18096512
NCBI-ProteinID: XP_006386823
UniProt: U5GM71
Position
2:complement(20099442..20102964)
AA seq 695 aa
MAASSAACLVGNGLSATGNAKQNSTKEFFCGGHLFVSTNLLPSSKTSRNVIAKEALDKRR
HDARRGFLKVLLGGISGSALLGGGRAYADEQGVSSSRMSYSRFLEYLDKGRVNKVDLYEN
GTIAIVEAVSPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIG
NLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLSFGQSKAKFQMEPNTGVTFDDVAGVDE
AKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS
EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL
TEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVTVDVPDVRGRTEILKVHASNKK
FDADVSLDVVAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGT
VMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLVPRGQARGLTWFIPADDPTLISKQ
QLFARIVGGLGGRAAEEVIFGESEVTTGAAGDLQQVTGLAKQMVTTFGMSEIGPWSLMDA
SAQSGDVIMRMMARNSMSEKLAEDIDSAVKRISDSAYEIALSHIRYNREAIDKIVEVLLE
KETMTGDEFRAILSEFVEIPAENRVPSSVSSPVAV
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggcagcgtcctcggcagcgtgtctagttggaaacggtttgtcagccaccggtaatgcc
aagcagaattcgaccaaggagttcttctgtggcggtcaccttttcgtttctaccaatctc
cttccttcatctaagacctcaagaaatgttattgcaaaggaagctttggacaagagacgg
catgatgcaagaaggggttttctgaaggttttgcttgggggaatcagtggatccgcttta
ctgggaggtgggagagcatacgccgatgaacaaggtgtttcttcctccaggatgtcttat
tctagattcttggagtatttggataagggtagggtgaataaggttgacttgtatgagaat
ggaaccatcgctattgtagaggctgtttcccctgagttgggtaaccgggtccagcgagtt
cgtgtgcaacttccaggactcagccaagagctgcttcagaagtttagagagaagaacatt
gactttgcagcacataatgctcaagaggactctggttctctgctattcaacctgattgga
aacctggcttttcctttaatcttaattggaggtctgttcctcctttctcgacgctcatca
ggaggaatgggtgggcctggtggtcctggtttccccttatctttcggccaatctaaggca
aagttccaaatggaaccaaacactggggtgacatttgatgatgttgctggagtggatgaa
gcaaagcaggatttcatggaggtagtggagtttctcaagaagcctgagagatttactgca
gtaggggctcgcattccgaaaggtgttcttcttgttggacctccaggtactgggaagact
cttctggccaaggcaattgctggtgaagcgggtgttccgtttttctccatttcaggttcg
gagtttgttgagatgtttgttggtgttggtgcctctcgagtccgggatctcttcaagaag
gccaaagagaatgctccttgcattgtgtttgtggatgaaattgatgccgtgggaaggcaa
agaggaactggaattggcggaggaaatgatgaaagagagcagacccttaaccagcttctg
acagaaatggatggttttgagggtaatactggcatcattgtcgttgcagcaactaacagg
gcagacattcttgactctgccttgttgaggccaggacggtttgatagacaggtgactgtt
gatgtcccggatgtacggggaagaacagagatactgaaagttcatgctagcaacaagaaa
tttgatgctgatgtgtctcttgatgtggtagccatgagaacacctggtttcagtggggct
gatcttgcaaacctcttgaatgaggcagctatcctagctgggcggcgtggaaagacagca
atttcatctaaagagattgatgattcaattgataggattgtcgctggaatggaaggaacc
gttatgacagatggaaagagtaaaagtcttgttgcataccatgaagttggccatgccatt
tgcggaactttgactccagggcatgatgcagttcagaaagtcaccctcgttccgcgaggc
caggcacggggtctcacctggtttattcctgcagatgatcccacattgatctccaagcag
caactttttgcaagaatagttggtggcttaggtggcagagctgctgaagaagtgatcttt
ggtgagtcggaggtgactactggggcagctggtgatttgcagcaggtcaccggtttggct
aaacagatggtaaccacgtttggaatgtctgaaattggcccatggtcactcatggacgca
tcagctcaaagtggtgacgtcatcatgagaatgatggcaaggaactcaatgtcagaaaag
ctagcggaagacattgattctgccgtgaagaggatatcagacagtgcatatgaaattgca
ttgagccacataaggtacaaccgtgaggccattgataagattgtggaagtcctcctcgag
aaggaaactatgactggtgatgagttccgagcaatcctctctgaatttgttgagattcca
gctgagaatcgggtcccttcctcagtatcctccccggtggctgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (22)   
   Pfam (22)   
All databases (35)   

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