KEGG   Populus trichocarpa (black cottonwood): 18096835
Entry
18096835          CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC18096835 isoform X1
  KO
K17925  sorting nexin-13
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pop04990]
    18096835
Domain-containing proteins not elsewhere classified [BR:pop04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   18096835
SSDB
Motif
Pfam: PXA Nexin_C PX
Other DBs
NCBI-GeneID: 18096835
NCBI-ProteinID: XP_024453313
Position
3:complement(7813114..7821442)
AA seq 1141 aa
MNARMSTQRQVIVRDLVEEAKKRIVMLVICVVGLSYLMSLTSASVWVNLPAAASLIILLR
YFSLDYEMRKKAAVYNNKPASTTSSTLSQNKSLEFTRVVEKSDWRRKVNSPVVEDAIDHF
TRRLVSEWVTDLWYSRLTPDKEGPEELVQIMNGVLGEFSSRMRNVNLIDLLTRDFINLIC
THLELFRAIQAKMEKRQSSVLTIEQRDKELRHVLAAENKLHPALFSTEAEHKVLQHLMDG
LISFTFKPADLQCSFFRYVVRELLACAVMRPVLNLASPRFINERIESVVISKANQRVAAA
QETSHFKPNGSSRISSNHFSRFLDPTDTGVELVQLKTDQCRGGPDAPEKDKVNGSHISKD
PLLYIDTQSSRTWSSLPMNSQIINEEGMQRHFSGGEWGERLDMMSRRKTAVLAPENFENM
WTKGRNYRKKEGENRLIEQVPQNSSASKYVTSDHSKRASNSKKDGVTKLDAPLAHNAQSV
GTEQSTVENPLHHTDQNMSNYPLFSSHKDGIRSLMRVDEIESGSTSSYTSEEEDANSVTG
LDSPGTKVWDGKTNRNLAVSHIHHPLENPDGHREKKTGRGLAHYQRLSRHQSGSKRSRPS
TQKVHVWQEIERKSFLSGDGQDVLSLKGHTKADDFSDDSEVESLDRVYSGATACSSATSV
SIPENHTSNVNSFKHSLMVDSIYKLRCEVLGANIVKSGSKTFAVYSISVTDVNNNSWSIK
RRFRHFEELHRRLKEYPEYSLHLPPKHFLSTGLDVPVIQERCKLLDIYLKKLLLLPTISG
SIEVWDFLSVDSQTYVFSNSFSIIETLSVDLDDKPSEKSKRVSNFIGPAINYLSARKEQL
SAECKESILQTKHNLGAVGARMISKDTPRSPVKSIKESGRSLKDPGSDSDMQKNVSSARN
LEENVRVGDSLEEMSASIHDTASDHMLPTEWVPANLTVPILDLVDVIFQLQDGGWIRRQA
FWVAKQILQLGMGDALDDWLIEKIQLLRRGSVVASGIKRVEQILWPDGIFITKHPKRRPP
PQQPTEVSSPKLISPHGQQPMEVSSPRLNDEQQQQDAVRRAKFVYELMIDNAPAAVVGLV
GRKEYEQRAKDLYFFLQSSVCTKQLAFDLLELLLLTAFPELDSVFRQLRVEKHKFGEFKP
N
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgaatgcgagaatgagcacgcaaaggcaggtgattgtacgggacttagtggaggaagcc
aagaagaggattgttatgttggttatttgtgttgttggattatcttatctcatgtcctta
acgagtgcctcagtttgggtcaacttgcctgctgctgcttccttgatcattctccttcgc
tacttttccctggattatgaaatgcgcaagaaagctgctgtatataacaacaaaccagcc
tccacaacatcaagcacactgtcacaaaacaaatctcttgaatttaccagggttgttgaa
aagtccgattggagaaggaaagtgaattcacctgttgttgaggatgcaatagatcatttc
actagacgtctagtctctgagtgggtgacagatctatggtactctcgcttaacccctgat
aaagaaggtccggaagaactggtgcagataatgaatggtgttcttggggaattttcaagt
cgcatgagaaatgtaaatcttattgatctactgacaagggattttattaatctcatctgc
acccacttggagctttttcgtgccattcaagcaaagatggaaaagcgacagtctagtgtg
cttaccattgaacagcgagacaaggaactaagacatgtcctggctgctgagaacaaattg
caccctgctttattttctactgaagctgagcacaaggttttgcagcatctgatggatggt
ctcatttcttttacattcaagccagcagatctgcagtgctctttcttccgttatgttgtt
agggaacttcttgcttgtgcggtaatgcgaccagtgttaaacttagctagcccaaggttc
ataaacgaaaggattgaaagtgttgtcatttctaaggctaatcaaagagttgctgcagca
caagagacatctcatttcaaaccaaatgggtcttcaaggatctcatccaatcatttttcg
aggtttttagatcctactgatactggggttgagcttgtgcagttaaaaaccgaccaatgc
agaggtggaccagatgcccctgaaaaagataaagtgaatggaagccatatctcaaaagat
ccattactttacattgatacccaatcttcccgcacatggagctcgctgcccatgaattcc
cagattattaatgaagaaggaatgcaacgacatttttcaggaggagaatggggtgagagg
ttggatatgatgtctcgcagaaagactgcagtccttgctccagaaaattttgaaaacatg
tggacaaaagggagaaactatagaaagaaagaaggggaaaatcgattgatagagcaagtc
cctcagaattcttcagcgagtaagtatgttacatcagatcattcaaagagggcatctaat
tccaagaaggatggtgtaaccaaactcgatgcccctctggcccacaacgcccagtctgtg
ggtactgagcaatctacagtagaaaaccctctacatcatacagatcagaatatgtcaaac
tatccactatttagttcacacaaagatggcatacggagcctcatgcgtgtagatgagatt
gaatcaggtagcactagctcttatacttctgaagaggaagatgcgaacagtgtaaccgga
cttgattctccaggaactaaagtctgggatggtaaaactaacagaaacctggctgtttcc
cacattcatcatccacttgaaaatcctgatggccacagggagaagaagactggcagaggg
cttgctcactatcaaagattatctagacaccagtctggcagtaaaaggtcaaggccaagc
actcagaaggtacatgtttggcaagagattgagagaaaaagcttcttgtctggagatgga
caggatgtacttagtttaaaaggacatactaaagctgatgatttcagtgacgattctgag
gttgaaagtttagatagagtttacagtggagcaactgcgtgttcatctgcaacatctgtt
tctattcctgaaaaccacacttcaaatgttaattcttttaaacattcattaatggtggac
tcaatttataagttgagatgcgaggttttgggtgcaaatattgttaagagtggctctaaa
acatttgctgtttattccatatctgttacagatgtaaataataatagttggtcgatcaaa
agaaggtttcgacatttcgaggagttacatagacgtctcaaagagtatccggaatatagt
cttcatttgccacctaagcattttctctctacaggcttagacgtgcctgtcatacaagag
cggtgtaaattgcttgatatatatctaaagaagctcttgctacttccaacaatttcagga
tccattgaagtctgggactttcttagtgttgattctcagacgtatgtgttctctaattcg
ttttctatcatcgaaacattatcagttgacctggatgacaagccctctgaaaagagtaaa
agggtttcaaattttattggccctgcaatcaattacttatccgctaggaaggagcaattg
agtgcagagtgcaaggaatctatattgcagacaaagcataatcttggggcagttggggca
cgaatgatttcaaaagacacgcctcgttctccggtgaagtctattaaagaatctggaaga
tcattgaaggatccaggaagtgattcagatatgcaaaagaatgtatcatctgctagaaat
ttagaggagaatgtaagagtgggtgatagcttagaagagatgtctgcgtctattcacgat
actgctagtgatcacatgctccctacagagtgggtgccagcaaatttgactgttcctata
cttgacctggtagatgtcattttccagctacaagatggtggatggatcaggaggcaggct
ttttgggtggccaaacagatactacaactaggaatgggcgatgctttagatgattggttg
atagagaaaatccagcttctgcgtaggggttcagttgttgcatcagggatcaagcgggtt
gagcagatactttggcctgatggaatattcatcaccaaacatccaaagagacggccacca
ccccagcaacccacggaagtgtcttctcctaaattgatttcccctcatggccagcaaccc
atggaagtctcttcacctagattgaatgatgagcagcaacaacaggatgcagttcgacga
gctaaatttgtatatgagctgatgattgacaacgcaccagctgctgttgtgggccttgtt
ggtcgaaaggagtatgaacaacgtgcaaaagatctctacttctttcttcagtcatcagtt
tgtacgaagcaactggcttttgatctccttgagctgctgcttttgactgcatttccagaa
ctggattctgttttcaggcagttgcgtgtagagaagcataaatttggcgagtttaaaccc
aattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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