KEGG   Populus trichocarpa (black cottonwood): 18098001
Entry
18098001          CDS       T01077                                 
Name
(RefSeq) AP-2 complex subunit alpha-1 isoform X2
  KO
K11824  AP-2 complex subunit alpha
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    18098001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18098001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    18098001
Membrane trafficking [BR:pop04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    18098001
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   18098001
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 RRN3
Other DBs
NCBI-GeneID: 18098001
NCBI-ProteinID: XP_006384679
Position
4:complement(20213437..20224365)
AA seq 1014 aa
MALSGMRGLSVFISDIRNCQNKEQERLRVDKELGNIRTRFKSEKGLTHYEKKKYVWKMLY
IHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRN
ETFQCLALTMVGNIGGREFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLYRKNPDVVN
IDGWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYWSCLPKCVKILERLARNQDIPQ
EYTYYGIPSPWLQVKAMRALQYFPTIEDPNVRRSLFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMSRMLMVTDVQDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSAADFAMREELSLKAA
ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAAAKAREYLDK
PAIHETMVKVSAYLLGEYSHLLARRPGCSPKEIFSVIHEKLPTVSTTTIPILLSTYAKIL
MHTQPADPELQKIVWAIFSKYESCIDVEIQQRAVEYFALSRKGAALMDILAEMPKFPERQ
SALLKKAEDAEVDSAEQSAIKLRAQQQMSNALVVTDQRPANGAPQIVGELSLVKIPSMSD
DHTSADQGLSQANGTLTTVDPQPASGDLLGDLLGPLAIEGPPGAIQSEPNAVSGLEGVPS
SADYAAIVPVGEQTNTVQPIGNINERFYALCLKDSGVLYEDPNIQIGIKAEWRAHQGRLV
LFLGNKNTSPLVSVQALILPPVHLKIELSLVPETIPPRAQVQCPLELMNLHPSRDVAVLD
FSYKFGTNMVNVKLRLPAVLNKFLQPISVSAEEFFPQWRSLSGPPLKLQEVVRGVRPLPL
IEMTNLFNSLRLTVCPGLDPNPNNLVASTTFYSESTRPMLCLIRIETDPADLTQLRMTVA
SGDPTLTLELKEFIKEQLVSIPTASRPPAPAPAAAQPTNPAALTDPGALLAGLL
NT seq 3045 nt   +upstreamnt  +downstreamnt
atggcgttatcaggcatgagaggtctctctgtctttataagcgatattcgaaattgtcaa
aacaaagagcaagaaaggcttcgcgtcgataaagagcttggcaatatccgcactcgtttc
aaaagcgaaaagggtttgactcattatgaaaagaagaaatatgtttggaaaatgctttac
attcacatgctaggctatgatgtagattttggtcacatggaagctgtttccttaatatct
gcgccgaagtaccctgaaaagcaggttgggtacatagtgacatcatctttgctaaatgag
aaccatgattttctgagattagcaataaatacagtgcgcaatgatattattggtcggaat
gaaacttttcagtgcctggctttgactatggttgggaatattggtggaagagaatttgct
gaatctttggcaccagatgttcaaaagttactcatttctagtagctgcaggccgcttgtg
agaaagaaggctgcattatgtttgctgcgcttgtacagaaaaaatccagatgtcgtcaat
attgatggctgggcggatcggatggcacaactgctagatgaacgtgatcttggtgttttg
acgtcttctacgagccttcttgttgctttagtgtcaaataaccatgaggcatactggagt
tgtctaccaaagtgtgttaagatattggagcgacttgcgaggaaccaagatatcccacaa
gaatacacttattatggtatcccatctccttggcttcaggttaaggcaatgagggcgctt
cagtactttccaactattgaagatcctaatgttagaagatccttgtttgaggtcttacag
cggatactaatgggaactgatgttgtaaaaaatgtaaataagaacaatgcatcacatgct
gttctctttgaagcccttgctcttgtaatgcatcttgatgctgaaaaggagatgatgtct
cagtgtgttgcccttcttggcaagtttattgctgtacgtgaaccaaatatccgatatctt
ggcttggagaatatgagtcggatgttgatggttacagatgtgcaagatatcattaaaaga
catcaggctcagatcattacctcgttgaaagatcctgacatcagtatccgtcgacgtgct
cttgatttactctatggtatgtgtgatgtttcaaatgcaaaggacatagtggaagagctg
ttgcagtatcttagcgcagcagattttgcaatgcgtgaggagctgtctcttaaagctgcc
attcttgccgaaaagtttgctcctgatttgtcttggtatgtggatgtgatacttcaattg
attgacaaggcaggggattttgtcagtgatgatatatggtttcgtgttgtgcagtttgtt
acaaacaatgaagacctacagccttatgcagcagcaaaagccagagagtatcttgacaag
cctgccatacatgagaccatggtcaaggtcagtgcatatctccttggagaatacagccac
cttttggccagaaggcctggttgtagtccaaaggaaatatttagtgtcatacacgagaag
ctccctactgtatcaactacaaccattccaattcttctttccacatatgctaagatctta
atgcacactcaacctgcggacccagaactacaaaaaattgtctgggcaatatttagcaaa
tatgagagttgcattgatgttgagatacaacaacgagcagttgagtattttgcattaagt
aggaagggtgcagctctaatggacattttggctgaaatgcctaaattccctgagcgtcag
tctgcattgttaaaaaaagctgaggatgctgaagtagattctgcagagcaaagtgctatt
aagttgcgggcacagcagcaaatgtctaatgcattggttgtaacagaccaacggcctgct
aatggcgcacctcaaattgttggcgagcttagtctagtaaaaattcccagcatgagtgat
gatcatacttcggcagaccaaggattgtcccaggcaaatgggactttgactacagtagat
cctcaacctgcttcaggagatctcctaggtgatctcctgggtccactggctattgaagga
cctcctggagctatccaatctgagccaaatgcagtttctggactggaaggggttccaagt
tcagcggactatgcagccattgttcctgtaggagagcaaaccaatactgttcagccaatt
ggaaatatcaacgaaagattttatgctttgtgcttgaaggatagtggtgttttatatgag
gatccaaacattcagattggtattaaagcagagtggcgagcgcatcaaggacgtcttgtc
cttttcttgggaaacaaaaacacttctccacttgtttctgttcaggctctgatactaccc
cctgtccatttaaaaatagagctctccttagtacctgaaactattcctccacgggcacag
gtgcaatgcccgcttgaattaatgaatctccacccaagcagggatgtcgctgttcttgac
ttctcttacaagtttggtacaaacatggtcaatgtcaagcttcggcttccagctgttcta
aacaaatttctacagcctatttcagtatctgctgaagagtttttcccacaatggagatca
ctttcaggaccaccactgaagcttcaagaagtagttagaggcgttaggccattgcctctc
attgaaatgacaaatctatttaacagtttgaggttgacagtttgtccggggcttgatcca
aaccccaacaacctggttgcaagtacaactttctactcggagagtacacggcccatgctt
tgcttgataagaattgaaacagacccagcagatctaacgcaattgcggatgacggttgcc
tcaggggacccaacactgacattagagctcaaggagtttatcaaagaacaattagttagt
attcctacagcatcacgtccacctgcaccggcaccagcagcagctcagccaaccaatccg
gcagctttgacagatcccggggctctgctggctggtttgctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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