KEGG   Populus trichocarpa (black cottonwood): 18098340
Entry
18098340          CDS       T01077                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein RABA2a
  KO
K07904  Ras-related protein Rab-11A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    18098340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18098340
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    18098340
   04031 GTP-binding proteins [BR:pop04031]
    18098340
Membrane trafficking [BR:pop04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    18098340
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   18098340
  Exosomal proteins of colorectal cancer cells
   18098340
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    18098340
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase DLIC
Other DBs
NCBI-GeneID: 18098340
NCBI-ProteinID: XP_024455064
Position
4:23031962..23037030
AA seq 215 aa
MARRADEEYDYLFKVVLIGDSGVGXSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI
MLIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKK
SLSSEESAPASIKDGKTIVVGGPEPDTKKTCCSSS
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcgaggagagcagacgaggaatacgactacctgttcaaggtagtattaatcggcgac
tcaggagtagganaatcgaacctcctctcccgatttactcgcaacgagttctgtttggag
tccaagtccaccattggcgtcgaattcgctactcgcactcttcaagttgaaggaaggact
gtgaaagctcagatatgggacacagctggacaggagcgatacagagcaatcaccagtgcc
tactataggggtgcccttggagctcttcttgtatatgatgttacaaagccaacaacattt
gaaaatgtgagtcggtggctgaaggagctgagggatcatgcggattccaatattgtgatc
atgttaattgggaacaagactgatctgaaacatcttcgagcggttgccaccgaggatgct
caaagttatgcagagaaagaagggcttgcatttatagagacatccgctctcgaagcaaca
aatgttgagaaggctttccagacaattctttcagagatatataggatagttagtaagaag
tcactttcttcagaagagtcagcacctgctagtatcaaagacgggaagacaattgtagtt
ggaggacctgagcccgacactaaaaagacttgctgctcttcatcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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