KEGG   Populus trichocarpa (black cottonwood): 18098357
Entry
18098357          CDS       T01077                                 
Name
(RefSeq) chloride channel protein CLC-c
  KO
K05016  chloride channel 7
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pop01009]
    18098357
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pop04040]
    18098357
Protein phosphatases and associated proteins [BR:pop01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     18098357
Ion channels [BR:pop04040]
 Chloride channels
  Chloride channel (CLC)
   18098357
SSDB
Motif
Pfam: Voltage_CLC CBS
Other DBs
NCBI-GeneID: 18098357
NCBI-ProteinID: XP_006385076
Position
4:23136959..23143920
AA seq 766 aa
MEDYSNREKNDLEIDDDKEHSVSMLREPFLVRNRKNNTSQIAIVGANTCPIESLDYEIAE
NELLKQDWRSRKKAEIFQYVVLKWTLALLIGLGTGLVGFFNNLAIENIAGFKLLVTNNLM
LKEMYYQAFATYAGCNVVLAIAAAALCAYVAPAAAGSGIPEVKAYLNGVDAPSILAPATL
FVKIFGSIFGVAAGFVVGKEGPMVHTGACIASFLGQGGSRKYHLTWKWLRYFKNDRDRRD
LITCGSAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSLIEFCRT
GKCGLFGQGGLIMFDVNSTKATYSTPDLLAVMFLGVIGGVFGSFYNYCVDKVLRTYSIIN
ERGPSFKILLVIVISLLTSCCSYGLPWLSQCIPCPPHLAEQCPTESRSGNFKNFQCPPNH
YNNLASLFFNTNDDAIRILFTSGSEKEFDLSTLLVFFVAIFCLGIVTYGIAVPSGLFIPV
ILAGASYGRLVGTLLGPLSNLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLMLP
LMMLVLLISKSVADIFNKGVYDQIMKIKGLPYMETHAEPYMRHLIASDVVSGPLVSFSGV
EKVGNILHVLRVTRHNGFPVIDEPPYSDAPELCGLVLRSHLLVLLKGKKFTKQRVKTGSD
IVRGFKAHDFAKAGSGKGVKLEDLEITEEEMEMYIDLHPIANTSPYTVVESMSLAKAAVL
FRELGLRHLCVVSKTPGMPPIVGILTRHDFTPEHVLGLYPHIKPHK
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggaggattatagtaatagagaaaagaatgatttagagatagatgatgataaggaacac
agtgtgtcaatgttgagagagccatttcttgttaggaatagaaagaacaatacttcacag
attgccattgttggtgctaatacctgccccatcgaaagccttgattatgagattgctgag
aatgaacttttgaaacaggactggagatctcgaaagaaggctgagatatttcagtatgtt
gtcctcaagtggacacttgctctcctcattgggttaggtacagggcttgtcggctttttc
aataaccttgccattgagaatatagctggtttcaaacttctggtgacaaacaatctcatg
cttaaggagatgtactatcaggcatttgcaacttatgctggttgcaatgtggttttggct
attgctgctgcagccttatgtgcttatgttgctcctgcggcagcaggatctggtatacca
gaggttaaagcatacctcaatggtgtagatgctccttctattttggcacctgctaccctt
tttgtaaagatatttgggtccatatttggggttgctgctggatttgttgttggcaaagaa
ggacccatggtgcatactggtgcttgcatagcctcctttcttggacagggaggttctcgt
aagtatcatttgacatggaaatggctgagatacttcaaaaatgatcgagaccggcgagat
ttgatcacatgtggttctgctgctggtgtagcagctgccttccgtgctcctgttggcggg
gtcttatttgcccttgaagaagctgcttcctggtggaggagtgcccttctttggaggaca
ttcttcacaacagctgtagtagcagttgtattgagaagtctcatagaattttgccgaact
ggaaaatgtgggctgtttggacaaggaggtctgatcatgtttgatgtaaattcgacaaaa
gctacttacagtaccccagatctactagcagttatgttccttggagtgataggaggtgtt
tttggaagcttttacaactattgtgttgacaaggtccttcgcacttacagcatcatcaat
gagagaggtccttcgtttaagatcctgcttgttattgtcatttccctgctgacctcttgt
tgctcctacggcctcccatggctttcacagtgcattccctgtccccctcacctggctgag
caatgccccactgaaagtcgctctggaaacttcaagaatttccagtgtccaccaaaccac
tataacaatcttgcttccctctttttcaacaccaatgatgatgccatccgcatcttattc
acttctggcagcgaaaaagaatttgacctctccacccttctggttttcttcgttgctatt
ttctgccttggcattgttacttatggcattgctgttccctctgggctcttcatcccagtc
attcttgctggggcctcttatggccgtcttgttggaacactgctcggtcccctttctaat
cttgatgtgggtctctttgcccttcttggagctgcctccttccttggtggcaccatgaga
atgacagtttctctttgtgtcatacttctcgaactgactaatgatctgcttatgcttcca
ttaatgatgctagtgctcctcatttcaaaatctgtggctgatattttcaataagggtgtt
tatgatcaaattatgaaaattaaaggattgccttatatggaaacccatgcagaaccatac
atgagacaccttattgcaagtgatgttgtttctggtccattagtttcattctctggggtt
gaaaaggtagggaacatattacatgtcctgagagtaacaaggcataatggatttcctgtg
attgacgagccgccttattcagatgctccagaattatgtgggcttgtcttgaggtctcat
ctgctcgtgttgcttaaaggaaagaaatttacaaagcagagagtaaagacaggatcagat
attgtgaggggtttcaaggcacatgactttgcaaaggctggatcgggcaaaggggtgaag
ctggaagatttggagatcacagaggaggagatggagatgtatattgatctccatcctatt
gctaacacatctccatacaccgtggttgaatccatgtctctagctaaagctgctgttctc
tttcgcgaacttggccttagacacttgtgtgtggtgtcgaagacgccagggatgcctcct
attgttggaatcttgactcggcacgacttcaccccggagcatgtactggggctttaccca
catattaaaccccacaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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