KEGG   Populus trichocarpa (black cottonwood): 18098358
Entry
18098358          CDS       T01077                                 
Name
(RefSeq) dynamin-2A isoform X1
  KO
K01528  dynamin 1/3 [EC:3.6.5.5]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    18098358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18098358
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    18098358
Enzymes [BR:pop01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.5  dynamin GTPase
     18098358
Membrane trafficking [BR:pop04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Dynamin
    18098358
  Lipid raft mediated endocytosis
   Caveolin-mediated endocytosis
    18098358
   RhoA-dependent endocytosis
    18098358
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18098358
SSDB
Motif
Pfam: Dynamin_N Dynamin_M GED PH PH_8 MMR_HSR1 PH_11 GTP_EFTU ARGLU AIG1 PH_20 AAA_16
Other DBs
NCBI-GeneID: 18098358
NCBI-ProteinID: XP_006385078
UniProt: U5GH95
Position
4:23147256..23157571
AA seq 920 aa
MEAIDELAQLSESMRQASALLADEDIDETTSSSSSSRRSSTFLNVVALGNVGAGKSAVLN
SLIGHPVLPTGENGATRAPISIELSRDSSVSSKSIILQIDSKNQQVSASALRHSLQERLS
KGSSGRSRDEIYLKLRTSTAPPLKLIDLPGVDQRIVDDSMISDYVQHNDAILLVVIPATQ
APEISSSRALRIAKEYDAESTRTVGVISKIDQAATESKALAAVQALLLNQGPPKTSDIPW
VALIGQSVSIASAQSASAPENSLETAWRAESESLKSILTGAPPSKLGRVALVDALAGQIR
SRMKLRLPNLLSGLQGKSQIVQDELVGLGEQMVSSSEGTRALALELCREFEDKFLLHLMG
GEGNGWKVVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIK
GVLELAKEPSKLCVDEVHRVLVDIVSSAANATPGLGRYPPFKREVVAIASSALDGFKNEA
KKMVVALVDMERAFVPPQHFIRLVQRRMDRQRREDELKNKSSKKAVDAEQSILNRATSPQ
TGVQQSGGSLKSMKDKSNQQDKDAQEGSALKTAGPGGEITAGFLLKKSGKTNGWSKRWFV
LNEKSGKLGYTKKQEERHFRGVITLEECNIEEVSEEEETPSKSSKDKKANGPSSEKGPSL
VFKITSRVQYKTVLKAHSAVVLKAESVADKVEWLNKLRNVIQSKGGQVIGESGPPMRHSM
SDGSLDTIARRPADPEEELRWMSQEVRGYVEAVLNSLGANVPKAVVLCQVEKAKEDMLNQ
LYSSISAQSTARIEELLQEDQNAKRRRERYQKQSSLLSNLTRKLSIHDNRAAAASNWSDG
GGGGAESSPRTNGPSSGEDWRNAFDAAANGPADSFGGPSRSHSRRNSDPAQNGDVNSNSS
RRTPTRMPPVPPPSGSSYRY
NT seq 2763 nt   +upstreamnt  +downstreamnt
atggaggcgatcgatgaattggctcagctatcggaatctatgaggcaagcatctgccttg
ctcgccgatgaagatatcgatgaaacgacgtcgtcgtcttcttcttctcgacgctcctcc
actttcctcaatgtcgttgctctcggcaatgtcggcgccggcaaatctgctgttttgaat
agtttaatcggacatcctgttttgccaactggtgaaaatggtgctacccgggctccgata
agcatcgagctaagtagggatagttctgtaagcagtaaatcgattattttgcaaattgac
agcaaaaatcaacaggtttctgcgagtgcgcttcggcattctctacaggaaaggctaagt
aaaggttcctcaggcaggagtcgtgatgaaatatatctgaaacttcgtaccagtacagcc
ccaccattgaaattgattgacttgcctggggtggatcaaagaattgtagatgactcgatg
atcagtgattatgttcagcacaatgatgctattctgctagttgtaatacctgctactcag
gcaccagaaatttcttcttctagagccctcagaatcgcaaaggaatatgatgcagagagt
accagaacagttggtgttattagtaaaattgatcaagcagctacagagtcaaaagctctt
gcagctgttcaagctcttcttttgaatcagggaccaccaaaaacatctgatattccatgg
gttgcattgattggtcaatctgtttccattgcttcagcccaatcagcaagtgcacctgag
aactctttggaaactgcttggcgagctgaaagtgaaagtctaaaatccatattgactgga
gccccaccaagcaagcttgggagagttgctctagtggatgcccttgctggtcagatccgt
agtcgcatgaaactcaggcttcccaatctcctttctgggcttcaggggaaatctcaaata
gttcaggatgaattggtggggcttggggagcaaatggttagttcttctgaaggtacaaga
gctttagctttggagctctgccgtgagtttgaggacaaatttcttctgcatcttatgggt
ggtgaaggtaatggttggaaagttgttgcgagttttgagggtaattttccaaacagaatc
aagcagctacctttagataggcattttgacataaacaatgtcaaacggattgtcctagaa
gccgatggttatcaaccatatcttatatctccagagaaggggttaaggtccttaataaaa
ggtgtccttgagctggcaaaggaaccctcaaagctatgtgttgatgaggtgcatcgtgta
ctagtggatatagtatcttctgctgcaaatgctactcctggtcttggaaggtatcctcct
ttcaagagagaggttgttgccattgcaagttctgcacttgatgggtttaaaaatgaagct
aagaaaatggtagttgccctagttgatatggagcgtgcatttgttccacctcaacacttc
atccgattggtgcagaggcgaatggataggcagcgccgtgaggatgagctaaagaacaaa
tcttcaaaaaaggcagttgatgcagagcaatctattttaaatagggcaaccagcccccag
acaggtgttcaacaatctggaggaagcttgaaatcaatgaaagataaatccaatcagcag
gataaagatgcacaagagggatctgccttgaaaactgctgggcctggtggtgagataaca
gcagggtttttgttgaagaaaagtggaaaaactaatggctggagtaagcgttggtttgtt
ttgaatgaaaaaagtggcaagcttggttacaccaaaaagcaagaagaaagacacttccgt
ggggttattactttggaggaatgcaatattgaagaagtttctgaagaagaagaaacccca
tcaaaaagttccaaggataaaaaggcaaatggaccaagttctgagaaaggacctagtctt
gtgttcaaaataactagtagagttcaatataagactgtcttgaaagctcacagcgctgtt
gtattaaaagctgagagcgtggctgataaggttgagtggctaaacaagttgagaaatgtc
atccagtctaaaggaggccaagtgattggtgaatctgggcctcccatgcgtcatagcatg
tctgatggttccctagatacaatcgctagaagacctgctgaccctgaagaagagctccgg
tggatgtcacaagaagtacgcggctatgttgaagctgttcttaacagccttggtgccaat
gtcccaaaagcagttgttctttgccaagtagagaaagccaaagaagacatgcttaatcaa
ttatatagctctataagtgcacaaagcacagcaaggattgaggagctgctccaggaggac
cagaatgcaaagaggaggagagaacgctatcagaaacagtcctctcttctttcaaatctc
actaggaaacttagcatccatgataatcgagcagctgctgcttccaactggtctgatggt
gggggtggtggagcagaaagcagcccaagaacaaatggaccatcatcaggagaagactgg
agaaatgcatttgatgcggcagccaatggacctgccgacagttttggtggcccatcgagg
tctcacagccggcgaaacagtgatccagctcagaatggtgatgtaaactcaaacagcagt
cgccgcacacccactcgaatgccacccgtgccaccaccgtctggttcatcctataggtac
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (28)   

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