KEGG   Populus trichocarpa (black cottonwood): 18101089
Entry
18101089          CDS       T01077                                 
Name
(RefSeq) cold shock protein 1
  KO
K09250  cellular nucleic acid-binding protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    18101089
Transcription factors [BR:pop03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    18101089
SSDB
Motif
Pfam: zf-CCHC CSD zf-CCHC_5 zf-CCHC_3 OB_RNB zf-CCHC_4 zf-CCHC_2 EcoRI
Other DBs
NCBI-GeneID: 18101089
NCBI-ProteinID: XP_006380594
UniProt: U5G7X6
Position
7:complement(5980963..5982127)
AA seq 243 aa
MAEEQAADVAADVAATKEERSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYR
TLYEDDVVEFTILLTEDKYQAIEVTAPGGGPIKRRTTTSGGFSRRNNNNNNNGVGCFNCG
NPGHIARDCNNNSSKSYNNYNNNNNNRGADFGCYKCGSSGHFARECTKGNNNGCYSCGGI
GHVARDCPGGSGACYNCGGYGHLARDCTSARVTGGGRFGGGNSGGCFNCGNEGHFARDCP
EQS
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcggaggagcaagcggcagatgtggcggcagatgtggcggcgacaaaggaggagaga
tcgaccggcagggtggttcgattcagcgacaagaaaggatttggattcataaaacctgat
gttggcgacaaagatctcttcgttcaccactccgccatcaaatctgacggtggctaccgt
actctttacgaagacgacgtcgttgagttcactattttactgactgaagacaagtatcaa
gctattgaagttactgcccccggtggcggacctatcaaacgccgcaccaccacctccggt
ggtttcagccgccgcaacaacaacaacaacaacaacggtgttggctgtttcaattgtggg
aatcctggccatattgcgagggattgcaacaataacagtagtaagagttacaataattac
aacaacaacaacaacaatcgcggtgccgattttggttgctataagtgtggtagcagtggg
cattttgcgagggagtgcacgaaggggaataacaatggatgttacagttgtggagggatt
gggcatgtggcaagggactgtccgggtgggagtggagcttgttataactgcggtgggtat
gggcatttggctagggattgcaccagtgcaagagtaactggtggtggaaggtttggcggt
ggtaatagtggtggatgttttaattgtggtaatgaagggcactttgctagggattgtcct
gagcagtcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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