KEGG   Populus trichocarpa (black cottonwood): 18101098
Entry
18101098          CDS       T01077                                 
Name
(RefSeq) alpha-mannosidase isoform X1
  KO
K01191  alpha-mannosidase [EC:3.2.1.24]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00511  Other glycan degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00511 Other glycan degradation
    18101098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18101098
Enzymes [BR:pop01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.24  alpha-mannosidase
     18101098
Membrane trafficking [BR:pop04131]
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Selective cargos
    18101098
SSDB
Motif
Pfam: Glyco_hydro_38N Glyco_hydro_38C Alpha-mann_mid Laman-like_dom Glyco_hydro38C2 Glyco_hydro_57
Other DBs
NCBI-GeneID: 18101098
NCBI-ProteinID: XP_006380603
UniProt: U5G4R2
Position
7:5871579..5881026
AA seq 1011 aa
MEKLERDLTWFDGWVLIAFVVVFGLHGTVVNGGYVDYNTGGGVVPGKLNVHLVPHSHDDV
GWLKTVDQYYVGSNNSIQGACVENVLDSVVESLRRDSNRKFVFVEMAFFQRWWVEQSEEI
QEQVRKLVDAGQLEFVNGGWCMHDEATCHYIDMIDQTTLGHRAIKEQFNKTPRAGWQIDP
FGHSAVQAYLLGTELGFDSVHFARIDYQDRAKRKDDKALEVIWRGSKTFGSSSQIFANAF
PVHYSPPNGFHFEVFDDFVPVQDNPLLDDYNVEQRVNDFINAAMTQANVTRTNHIMWTMG
DDFQYQYAESWFKQMDKLIHYVNKDGRVNALYSTPSIYTDVKNAANESWPLKTDDYFPYA
DTENAYWTGFFTSRPALKRYVRQLSGYYLAARQLEFLVGKKSTGPNTYRLGDALGIAQHH
DGVTGTAKQHTTNDYEKRLAIGALEAEATVSSALSCLVSNKSRDQCAKPALNFSQCQLLN
ISYCPPTEEAIANGKRLVMVLYNALGWNRTDVIRIPVNDPNLVVADSYGKHIETQYVTMD
NTTSNLRNFYLKAYGFPSIQVPRYWLHFQVSVPPLGWSTYFIARATGIGKRRNGLSVMDS
PQNDTIEIGSGNLKMSFSSMTGQLKRMYNSKTGVDVPIQQSYFWYGSSSELMQSSGAYIL
RPDGSPPHVVARSVPLQVHRGPLFDEVRQQFNSWIYQVTRVYKDQEHAELEYTIGPIPLE
DSVGKEVITRMTANMATEKVFYTDSNGRDFLKRIRDYRADWSLSVNEPVAGNYYPLNLGI
FTMDKRSELSVLVDRATGGASIEDGQLELMLHRRTLHDDSRGVNEALDESVCIGDECEGL
TIRGNYYLSINQVGAGAVWRRTTGQEIYTPLLAAFTQEKEETSKASHVATGTAMDPGYSL
PLNVALITLQELDDGSVLLRLAHLYEAGEDAAYSTLATVELKKMFSGKAIKELKEMSLSS
NQEKSEMKKMTWKVEGDNGEQPSPVRGGPVDSSTLVVELGPMEIRTFLLQF
NT seq 3036 nt   +upstreamnt  +downstreamnt
atggaaaagcttgagagggatttgacatggtttgatgggtgggttcttattgctttcgtg
gttgtttttggcttgcatggtacagtagttaatggtggttatgtggattacaatactgga
ggtggagttgtgccaggaaagttgaatgtccatttggtaccacattcacatgatgatgtt
ggttggttaaagactgttgatcaatactatgttggatcaaataacagtattcagggtgct
tgtgttgagaatgtgctggattcagtggtggaatcattgcgtcgagattccaataggaag
tttgtttttgttgaaatggcttttttccagcgatggtgggtagaacaaagtgaggaaatt
caagagcaagtgaggaaacttgttgatgctggccaattggaatttgtaaatggtggttgg
tgtatgcatgatgaagcaacttgtcattacatagacatgattgaccaaacaactctaggt
caccgcgcaataaaggagcagtttaacaagactcctcgtgctgggtggcagattgatcca
tttggacattctgcagtgcaagcttaccttcttgggactgagcttggatttgattctgta
cactttgcaaggattgattaccaggacagagcgaagcgcaaagatgataaagctcttgaa
gttatatggcgtggatccaagacatttggttcttcctctcagatttttgccaatgccttt
cctgttcattatagtcccccaaatggttttcattttgaagtatttgacgactttgtgcca
gtccaggacaacccccttttagatgactacaatgttgagcagcgagttaatgattttata
aatgctgctatgacccaagcaaatgtgacaaggacaaaccatattatgtggaccatgggt
gatgatttccagtatcaatatgctgagtcttggttcaagcagatggacaaattaattcac
tatgttaacaaggatggtcgagtgaatgctttgtattctacaccatctatctacactgat
gtgaaaaatgcagcaaatgagtcttggccactgaaaactgatgattatttcccttatgca
gatacggaaaatgcctactggactggcttttttactagtcgcccagccttgaagcgatat
gttcgtcagctgagtggatattatttggcagcacgacaactggagttcctggttgggaaa
aaatccactggtcccaacacatatagacttggagatgctttaggcattgcacagcaccat
gatggtgtcactggcactgccaaacaacacactacaaatgactacgaaaaacgccttgct
attggagccttggaggcagaagctactgtgagttctgctctgtcatgcttggttagcaat
aaatcaagagatcaatgtgcaaaaccagcattgaattttagtcagtgtcaattactaaat
atcagttactgcccaccaacagaggaagctattgcaaatgggaagagattggtcatggtt
ttgtacaacgctcttggatggaatcgcactgatgttattaggataccagttaatgaccct
aatctagttgttgctgattcctatggaaaacatatcgagacgcaatatgttaccatggat
aataccacaagcaacttaagaaacttttatttgaaggcatatggatttccatccattcaa
gtgccccggtattggctgcactttcaagtgtctgtgccaccactcggttggagtacctac
tttattgctcgtgctactgggatagggaaaagaagaaacgggctctctgtgatggacagc
ccacagaatgataccattgaaatcggatctggaaatttgaaaatgtccttttcttcgatg
actggtcaactcaaacggatgtataattccaaaacaggggttgatgtgccaatacagcaa
agctacttttggtatggttcaagctctgagctcatgcaatcttcaggtgcatatatctta
aggcctgatggttcccctccccatgttgttgcaagatcagtgcccctgcaggttcatcgt
ggaccactgtttgatgaggttcgccaacaatttaattcatggatctaccaggtaacaaga
gtttacaaagatcaagagcatgcagaacttgaatacactattggcccaattccccttgaa
gacagtgttggaaaagaggtcatcacaagaatgacagcaaatatggccacagaaaaggtg
ttttatactgattctaatggaagggactttctaaagcggattcgagactacagagctgac
tggagcctctcagtcaatgaacctgttgcaggaaactattatccgcttaaccttggaatt
tttacgatggataagagatctgaattatcagtcttggttgatcgtgccactggaggagcc
agcattgaagatggtcaactagaactaatgcttcataggcggactctccatgatgattcc
agaggagttaatgaagcccttgatgaaagtgtttgcattggagatgaatgtgaaggacta
acgatcagaggaaattattatttgagcatcaaccaggtaggggctggagcagtctggcgc
cgaacaactggccaagagatttacacaccacttcttgcagctttcacacaggagaaggaa
gagacttcgaaagcatctcatgtggccacaggaactgccatggatcccggctacagcttg
ccactaaatgttgctttgataacccttcaggagctcgatgatgggagtgttcttctccgt
ctggctcatttatatgaggcgggagaagatgctgcttattcaacactagctacagttgaa
ctgaagaagatgttcagtggaaaagcaattaaggagctgaaggaaatgagcttgtcatca
aaccaagagaaatcagagatgaagaagatgacatggaaggttgagggagacaacggagag
caaccttcacctgttagaggtggtcctgtcgatagttcaactctcgttgttgaacttggt
cccatggaaattcgcacattcttgctacaattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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