KEGG   Populus trichocarpa (black cottonwood): 18106738
Entry
18106738          CDS       T01077                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00040  Pentose and glucuronate interconversions
pop01100  Metabolic pathways
Module
pop_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    18106738
Enzymes [BR:pop01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     18106738
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 NosD
Other DBs
NCBI-GeneID: 18106738
NCBI-ProteinID: XP_006372684
UniProt: A0A2K1X1F9
Position
17:389165..391010
AA seq 398 aa
MAGGLPLPMIPHPITLFFIIFFAFSPLAKAAQFSVLSYGATPDGKTDSTKAFAAAWAQAC
ASTQPATISVPKGSFSLGQVRFQGPCNNRAILVRIDGTLVAPSDYKVIGNAKNWLIFEHV
NGVTVSGGTLDGQGAGLWSCKNSGKGCPRGATSLEFSNSNNIAITGLASLNSQLFHIVIN
GCQNVKVQGVKVSAAGNSPNTDGIHVQSSTGVTILNSRIGTGDDCVSIGPGTSSLWIENV
ACGPGHGISIGSLGKESQEAGVQNVTVKTTTFTGTENGLRIKSWGRPSNGFARDILFQHA
VMNNVQNPIVIDQNYCPGEKNCPGQVSGVKISDVTYQDIHGSSATEVAVKFDCSKKYPCT
GIKLEDVKLTYKNQPAEASCSNIAGGVASGLVQPTSCL
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggcaggcggccttccacttccaatgatcccccatcctattactcttttcttcatcatt
ttctttgcgttctcacctttagcaaaggcagcacaatttagtgtgttaagttatggtgcc
acacctgatggaaaaactgactcaaccaaggcctttgctgctgcttgggcacaggcatgt
gcctcaacacaaccagccacaatttctgttcctaaagggagtttctctttaggtcaagtg
aggtttcagggtccttgcaataatcgtgctatcttggtacgtatagatggtaccctagtc
gccccatcagattataaggtcattggtaacgctaaaaattggctaatctttgagcatgtt
aatggggttactgtatctggagggactcttgatggccagggtgctggactgtggtcttgt
aagaattccggcaagggttgccccagaggcgcaacgtcacttgagttttccaattcaaac
aatattgcaattaccggattggcatcattaaatagccagttgtttcacattgtcatcaat
ggttgccaaaacgtcaaagtgcaaggagtcaaagtctctgccgccggaaacagccctaac
acggatggtattcatgttcaatcatcaaccggtgtcaccatattgaattctaggattgga
acaggtgacgactgtgtatcgattggccccggtacctcaagtttgtggattgaaaatgtg
gcttgtggacctggccatggaatcagcattggaagtttaggcaaagaatcccaagaggct
ggtgtgcaaaatgttacagtcaagaccactacatttaccggtacagaaaatggactgaga
attaagtcttggggaaggcctagcaatggttttgctagagatattcttttccaacatgca
gtcatgaataatgtccaaaatcctattgtaatagaccaaaactattgccccggcgagaag
aattgccctggccaggtttctggtgtgaaaataagtgatgtgacctaccaagacattcat
ggatcatcagcaacagaagtggcggtcaaatttgattgtagcaaaaaatatccatgcact
gggatcaaattagaagatgtaaagctcacttacaagaatcagccagctgaagcatcatgc
agcaatattgctggtggagttgcttcaggacttgttcagcccactagctgtctataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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