KEGG   Populus trichocarpa (black cottonwood): 18107426
Entry
18107426          CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC18107426
  KO
K06001  tryptophan synthase beta chain [EC:4.2.1.20]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00260  Glycine, serine and threonine metabolism
pop00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
pop01230  Biosynthesis of amino acids
Module
pop_M00023  Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    18107426
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    18107426
Enzymes [BR:pop01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     18107426
SSDB
Motif
Pfam: PALP
Other DBs
NCBI-GeneID: 18107426
NCBI-ProteinID: XP_006373489
UniProt: U5FMX8
Position
17:11755745..11759141
AA seq 505 aa
MAIQATFIADPVLISSPSRISIRGWEQCIGSFVLKTRPRHPRLSNGGRVRARASLNADLK
AVGIPHQWYNVVADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIRQEASTDKFIDIPEE
VLDIYSLWRPTPLIRAKRLEKLLDTPARIYYKYEGGSPAGSHKPNTAVPQVFYNAQQGIK
NVVTETGAGQWGCSLAFACSLFGLDCEVWQVRASYDQKPYRRLMMETWGAKVHPSPSSIT
ETGRRILQMDPSSPGSLGIAISEAVEVAAKNADTKYCLGSVLNHVLLHQTVIGEECIKQM
EAIGETPDVIIGCTGGGSNFAGLSFPFIREKLNGKINPVIKAVEPAACPSLTKGVYAYDY
GDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYELGFMEAMAIPQIECFRG
AIQFARSEGLIPAPEPTHAIAATIREALHCKETGEAKVILMAMCGHGHFDLKSYEKYLQG
KMVDLSFDEEKIRASLDKVPQVTRN
NT seq 1518 nt   +upstreamnt  +downstreamnt
atggccattcaagcaactttcatagcagatccagttctcatttcaagcccatcaagaatc
tccatcagaggttgggagcaatgtattgggtcttttgtgttgaaaacgaggcctaggcat
ccgaggctttcaaatggaggcagagtcagagcaagagcttctctgaatgctgatttgaaa
gcggttggcattcctcatcagtggtacaatgttgttgcagatctttcagtgaaacctcct
cccccactgcatcctaaaacatttgaaccagtcaaacctgaagatttatctcctctattt
cctgatgagttgattaggcaggaggcaagcactgacaagttcatagatatcccggaagaa
gttcttgatatttacagtctctggcgcccaactccattgatcagagcaaagaggttggaa
aagcttctcgatacacctgccagaatttactacaagtatgaaggtggcagtccagccgga
tcccataaacccaacactgcagtcccacaagttttttacaatgcgcagcaaggcatcaag
aatgttgtgacagaaactggtgctggccaatggggatgttcattggcctttgcgtgcagc
ttatttggtcttgactgtgaggtgtggcaggttcgcgcttcttatgatcagaaaccatat
cgtagattaatgatggagacctggggtgcaaaggtacacccatctccatcaagcattacc
gagactggtaggagaattctccagatggatccgtcaagtccaggaagtttaggaatagct
atatcagaagctgtagaggttgcagctaaaaatgctgacaccaagtactgcttggggagt
gtgctgaatcatgttttgttgcatcagacagtcataggtgaggagtgcataaaacaaatg
gaggctattggtgaaacccctgatgtgataataggatgtactggtggagggtccaatttt
gcaggactcagtttcccattcatccgagagaagctcaatgggaaaatcaaccctgtcata
aaagctgttgaacctgcagcatgtccttcactgacaaaaggtgtatacgcatatgattat
ggagatacagcaggaatgactccattaatgaagatgcacactctaggacatgacttcatt
cctgaccctattcatgctggtggattgcgttaccatggcatggctccattaatttctcat
gtgtatgaactgggtttcatggaagcaatggcaatccctcagatcgagtgctttcgaggt
gccatacaatttgctcggtcggaaggactgataccagcaccggagccaactcatgcaatc
gctgctaccataagggaagcactgcattgtaaagagactggagaagcaaaggttattctc
atggcaatgtgtggacatggccattttgacctgaaatcttatgagaagtatttgcaagga
aagatggttgacttgtcattcgatgaggagaaaataagagcatcattggacaaagttcct
caggtgacaagaaattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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