KEGG   Populus trichocarpa (black cottonwood): 7456243
Entry
7456243           CDS       T01077                                 
Name
(RefSeq) truncated transcription factor CAULIFLOWER A isoform X1
  KO
K09264  MADS-box transcription factor, plant
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    7456243
Transcription factors [BR:pop03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box regulators of differentiation, Homeotic genes
    7456243
SSDB
Motif
Pfam: SRF-TF K-box Stn1_C DICT DUF5733
Other DBs
NCBI-GeneID: 7456243
NCBI-ProteinID: XP_024458870
Position
1:33775530..33787669
AA seq 208 aa
MVRGKVQLQRIEDKSSRQVCFSKRKRGLLKKAKELSVLCDVEMAVIIFSSTGKLFEFCSG
NSLRNILERYDTHKTKSQEIAICKNVDKTKQNHHAEYMGPSYMDANPLQMVQRYFEGKNI
EQLNLTQLIQLERELDSTLVYTRGRKNEAMMKSVTALHQKEQDLTDENNLIEREISAIIN
NGNLASQHGRVVEDPDCVHPSPLDLFHF
NT seq 627 nt   +upstreamnt  +downstreamnt
atggtgagagggaaggtgcagttacaacgaatcgaagacaaaagcagccgtcaagtgtgt
ttctcaaagagaaagagaggtttattaaagaaagctaaagaactatcggttctctgtgat
gttgagatggcggtcatcatcttctcctccactggcaagctcttcgagttttgcagtggc
aacagtttgagaaatatccttgagcgctatgacacacataaaactaaaagtcaagaaata
gcaatctgcaagaacgttgataaaaccaagcagaatcatcacgcagaatacatgggtccc
agctatatggatgctaacccactccaaatggtccaaaggtactttgaagggaagaacata
gaacagctaaatctaactcaactcattcagctagaaagagaactggactccacactagtt
tacaccagaggaagaaagaatgaagcaatgatgaagtccgtaacagccctccatcagaag
gaacaagatctgacagatgaaaataatctcatagaaagagagatatctgcaatcatcaac
aatggcaacctcgccagccagcatggccgtgttgttgaagatccggattgtgttcatcct
tctccactggacttgtttcacttttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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