KEGG   Populus trichocarpa (black cottonwood): 7457846
Entry
7457846           CDS       T01077                                 
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A
  KO
K03066  26S proteasome regulatory subunit T6
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03050  Proteasome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    7457846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pop03051]
    7457846
Proteasome [BR:pop03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     7457846
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_5 AAA_2 AAA_16 nSTAND3 PRS7_OB AAA_22 RuvB_N TIP49 AAA_28 AAA_18 Mg_chelatase AAA_3 AAA_14 PhoH AAA_33 Parvo_NS1 ATPase AAA_24 AAA_17 AAA_19 IstB_IS21 RNA_helicase ABC_tran AAA_7 DUF815 DUF2072 AAA_25 AAA_11 bpMoxR Sigma54_activat TsaE Zeta_toxin DUF5906
Other DBs
NCBI-GeneID: 7457846
NCBI-ProteinID: XP_006379809
UniProt: U5G5S8
Position
8:9782723..9786110
AA seq 427 aa
MAAVGVERRQQQQQTESTMTMTAEESCLAKTGAAKQGEGLKQYYIQHIHELLLHVRQKTH
NLNRLEAQRNDINSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDID
KSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKE
IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV
QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQ
LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRCDILKIHSRRMNLM
RGIDLKKIAGKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNM
SLRKLWK
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcagcagtaggagtggagaggaggcaacagcagcagcaaacagaatcaacaatgacg
atgacggcggaggagagctgcttggcgaaaacgggggcggcgaagcaaggagagggatta
aagcagtattacatccaacacatccatgagcttctgctacatgtccgtcaaaaaacccac
aatctcaatcgcctagaagctcaacgcaatgacattaattccagagtgaggatgcttaga
gaagagttgcagctacttcaagaacctgggtcatatgttggtgaagttgtcaaagtaatg
gggaagaacaaggtgttggttaaggttcatccagaggggaagtatgttgttgatattgat
aaaagtattgatatcacaaagatcactccatcaacaagggttgcccttcgcaacgacagc
tatgttcttcacttgatcttgcctagcaaagtggatcctctggtcaacctcatgaaggtt
gaaaaagttccagattctacctatgacatgataggtggtcttgaccaacaaattaaagag
ataaaggaggtcattgaacttccaattaaacaccctgaattgtttgagagtcttggaatc
gctcaaccaaagggtgttctcctctatgggcctcctggcactggaaaaactctactggct
agggcagtggctcaccacactgactgtactttcatcagggtttctggttctgaattagtt
cagaaatacattggagaaggctctagaatggtcagagagctctttgttatggcaagagag
catgctccatcaatcattttcatggatgaaattgacagtatcggatctgctcgaatggaa
tctgggagcggcaatggtgacagtgaggtgcagcgaactatgctggagcttctaaatcag
ctggatggatttgaagcatcaaacaagataaaggttttgatggctacaaatcggattgat
attctggatcaagctctccttcggccaggacgaattgacaggaagattgaatttccaaat
cccaacgaagactcacgttgtgatatcttgaaaatccattcaagaaggatgaatttaatg
cgtgggattgatttgaagaagatagctgggaagatgaatggtgcttctggtgcagagctc
aaggcggtgtgcacagaggctggaatgtttgctctaagagagaggagggtccatgttaca
caagaagattttgagatggcagtagcaaaggtcatgaagaaggagacagagaagaacatg
tcattgcggaagctctggaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (36)   
   Pfam (36)   
All databases (47)   

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