KEGG   Populus trichocarpa (black cottonwood): 7457974
Entry
7457974           CDS       T01077                                 
Name
(RefSeq) protein SLOW WALKER 1
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    7457974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pop03009]
    7457974
Ribosome biogenesis [BR:pop03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    7457974
SSDB
Motif
Pfam: UTP15_C WD40 NBCH_WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 7457974
NCBI-ProteinID: XP_002321043
UniProt: B9I9Y8
Position
14:complement(9165109..9167137)
AA seq 534 aa
MADLLVEQPQEITISKTFPTKPKLKSKPKTPSKTPESKYWSSFKSHQISNLISSIPSIDF
SPISPHHFAAANSASLTLFSPHTLSPASTISSSDVVTSCSFRCDGSLIAASDLSGLIRVF
DVKTRTPLRRLRSHARPVRFVKYPLLDKLHLVSGGDDSVVKYWDVAGESVVLDLYGHRDY
VRCGDCSPTDGEMFVTGSYDHTVKLWDVRVDNKESVIEVNHGNPVEDVIFLPSGGMVATA
GGNSVKIWDLIGGGKMVYSMESHNKTVTSICVGKVGKESGEEALQYRIFSVALDGYMKVF
DYAKMKVTHSMRFPAPLMSIGFSPDCMTRVIGSSNGIIFAGRRKAKEDVGESKVGNFWAL
GSVEEPQRRALRPTYFRYFHRSQGEKPNEGDHLIMRQKKVKLAEHDKLLKKFRHKEALVS
VLGGKNTENVVAVMEELVARRKLLKCVVNLDDEELGLLLGFLHKHSTMPRHSGLLTGLTR
KVLEMRAEDIRASDALKGHIRNLKRSVEEEIRIQHSLQEIQGVISPLLRIAGRR
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggcagaccttcttgtagaacaaccccaagaaatcaccatctccaaaaccttcccaact
aaaccaaagctaaaatccaaaccgaaaaccccatcaaaaacccctgaatccaaatactgg
tcttccttcaaatcccaccaaatttcaaacctcatctcctccatcccttccatcgatttc
tcacctatatccccacaccactttgccgccgccaattccgcctccctcacgctcttctcc
ccccacacactctctcccgcctccaccatctcctcctccgatgtcgtcacctcctgctcc
ttccgctgcgacggctccctcatcgccgcctctgatctctccggccttatccgggtattc
gatgtcaagacacgaacgccacttcgtcgcctgcggtcccacgcccgccctgttcgtttt
gtcaagtacccgttactagataagctccatttggtgtctggtggtgatgattctgtagtt
aaatactgggatgttgctggagagagtgtggttttggacctgtatggtcacagggactat
gtgagatgtggtgattgctctccaactgatggagagatgtttgtcactgggtcttatgac
cacactgtgaagctgtgggatgtgagagttgataataaagaatcagttattgaagtgaat
catggaaatcctgtcgaggatgtgatttttttgccttcaggcggaatggttgctacggca
ggagggaatagtgtgaaaatatgggatttgattggaggagggaagatggtttattctatg
gagagtcataacaagactgttacttctatttgtgttgggaaagtagggaaagagagtgga
gaggaggctttgcagtataggatttttagtgtggctttagatggttatatgaaggttttt
gattatgcaaaaatgaaggttactcattccatgaggtttcctgccccgcttatgtcaatt
ggattttcgccggattgtatgactagggttattgggtcttccaatgggattatatttgcc
gggaggaggaaggcaaaggaggatgtgggagagagtaaagtagggaatttttgggcgctg
ggcagtgtagaggaaccgcagaggcgggctttgaggccaacttattttaggtattttcat
aggagtcaaggggagaagccaaatgagggggatcatttgataatgaggcaaaagaaggtg
aaattggctgagcatgataagttgttgaagaagtttaggcataaagaagcattggtttca
gttttgggtgggaagaatacagagaatgtggtggctgtgatggaggaattagtggcgagg
aggaagttattgaaatgtgttgtgaatttggatgatgaggagcttgggttgttgttgggc
ttcttgcataagcactcgaccatgccaagacattctggtttattgacggggttgactaga
aaggtactcgagatgcgggctgaagatattagagcttctgatgcattgaaaggtcatatt
agaaaccttaaaaggtcggttgaagaggagatcagaattcaacattcactacaagagata
cagggtgtaatttctcctttattgagaattgctgggagaagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system