KEGG   Populus trichocarpa (black cottonwood): 7458538
Entry
7458538           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7458538
  KO
K16743  abnormal spindle-like microcephaly-associated protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pop03036]
    7458538
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    7458538
SSDB
Motif
Pfam: IQ CH Proteasom_PSMB Rcd1 Arm Ycf15
Other DBs
NCBI-GeneID: 7458538
NCBI-ProteinID: XP_024454410
Position
4:complement(1235813..1246178)
AA seq 1493 aa
MEGNEQFPCPSPYPQPFKDVSNFKTPKRPPNLSKFTSPSSQFFTASKRTPMSSSSFRPSL
SGQSRPKPASTTARRRLKAFEIEQSQSSRKAQIRKEQALKTLSKSLTTWINFLFENPSAC
GCSCNFTQNAVVGPSVVVGLGKREGGAAGVGDTWRSPKRSRDVTWQGGGGGGDGDVLNFK
RYGKLKEGLKEVCSVEDLMERMRVYLSLGCCKEVFDAMVLVVKTIDEGRLKMKPHCPIVT
DFGMKEKAMRILMCYNPVWLRIGLQIILGGDSLLPSGDIDSDQEISFLKMVIEKQFLSHT
GLAKTYAYNRKVEGLYRPGYYESLGNVILKRFLLLVLILDRTKLQSGLSLKYGIDGVDGG
SPLLFVVQSSIKSSRQMINDFLSSEVMHGEGNLLAHLVVIGYKVSYQQCSLVEYDFRVTD
LFAELQDGVRLCRAIQLLQNDSSILMKMVVPSDTRKRNLANCGLALQYLKRAGVTLQDED
GMTILEDDVANGDMELTVSLLWNMFVHLQLPLLLNKTTLANEILKIHGVNMDSANISPGS
SPLELLLSWIQAVCGKYDNKIDNFASLVDGKAIWCLLDYYFRKELSCSHSPKDPHESRRE
ESLMSAIDYTDSVHNFLLSQKLTTLLWNFPEVLHISDILEHSGAINHRSVVILLVFLSSQ
LTVKKTMDQLNFHKLLCCDCQERRTSSVGRCSLSSEAELDQDIIDGSSTEDAARKFRAIK
AWWQDMAERNNKFITQPGTSVLDCNSTSNLGIISQRENAAKVIQSHFRRSVERHNFLKMR
RAASFLQTAIRAWLMVKKRPFLLKFSSVTVQDFRCERWSQAENLGRYVKFIVDRHRFVKL
RRDVMLIQKATRIWIRQRHKSDCVGNLDVSTLDIVNAAIAVQKFIRGWAARSRYKDVQLE
KASSTCQFDGLTVQLSSKTIISRSIHEQQLAATKIQIHFQGWLLRRTFLIRKQAIMKIQS
NYRCLRCRRAFQQFCIAKKSAIVIQSCVRGWIVRRKVGRYRYLIGVLQRYCRAWLIRRDF
LFQKQAATQIQSAIRCLNCRTAFKSCKDATIEIQRFVRGHTTRNRLLGASHFSGGIASYG
NFLTSGVCFQSLKLKVMMSSVLKLQRWWRGILFLKLRTKSAIVIQAHIRGWIGRQMASRE
RQCVALQREAVLKIQSAVRCLNCWKAFHCCKQAAIEIQGFVRGEITRNRLLGASHFHRAT
ASYCKMQTSRVCLQSLELKIVMSSILKLQRWWRGVLLLKHRAKSAILVQSHVRGWIGRKK
ASRERQRVVVVQSHWKGFLARKNARGQLLDLRLRMQNSAKNVDDSMRIINRLIVALSELS
SMKSVSGILHTCATLDMTTEHSQKCCEKLVAAGAIDNLLKLIRSVSQSMPDQEVLKHALS
VLRNLARYPHLIEVLIDSQGVVEIILWQLLRNKEEGYFIASEVMKKICSHQKGVEMVLRK
PPIIKRLHSLVEELTRKANFEKKKPRGMAVRDNMERRLREAVELLKLINSKLW
NT seq 4482 nt   +upstreamnt  +downstreamnt
atggaaggcaacgagcaatttccatgtccgtcaccgtatccccagccgttcaaagacgta
tcgaatttcaaaaccccaaaacgccctccaaatctctccaaatttacttctccgagctct
caattcttcactgcttcaaaacgaaccccaatgtcctcctcctccttccgtccttcctta
tcaggccagtccaggcccaagcctgcttcaaccacggcccggagaaggctcaaggcgttc
gagatcgagcagtcacagtcatcaagaaaggcacagattaggaaagaacaggcgctgaaa
acactgtcgaaatctctcactacttggattaatttcctgttcgaaaaccctagtgcttgt
gggtgctcttgcaatttcacccagaatgcggtggtggggcccagtgttgtggtggggttg
gggaagagggaaggtggggcagccggggtgggtgatacgtggaggagtccgaagaggagt
agggatgtgacgtggcaaggaggagggggtggtggggatggtgacgtgttgaattttaag
aggtatggaaaattgaaggagggattgaaggaagtgtgtagtgtggaggatttgatggag
agaatgagggtttatttgagtttgggatgttgtaaggaagtttttgatgctatggttctt
gttgttaagactatagatgaagggaggttgaaaatgaagccacattgtcctattgtaaca
gattttggcatgaaggagaaagccatgcgaattctcatgtgctataatccagtttggctt
cgaattggattacaaattattcttggtggcgattccttgttgcccagtggagatattgat
tctgatcaagaaatatcattcttgaagatggtgatagagaaacaatttctttcacatact
ggactagcaaaaacttatgcttataacaggaaggttgaagggttatatagaccaggttac
tatgagtccttgggaaatgttatattgaagaggtttttgctgctggttcttattctagat
agaactaaattacagagtggtctttctttaaagtatggaattgatggagtagatgggggt
tcacctcttctgttcgttgtgcagtctagtataaagtctagccgtcaaatgattaatgat
ttcttatcatcggaggtaatgcacggagaagggaatcttcttgcacatctagtggtcata
ggttacaaagtatcttatcaacagtgttccctcgttgagtatgacttcagagtgacagat
ttatttgcggagcttcaagatggagtgaggctttgtagagccatccagctcttacaaaat
gattcctctattcttatgaaaatggtagttccatcagatacccgcaagagaaatttagca
aattgtggccttgccctgcaatatctaaagcgtgctggtgtaacattgcaagatgaagat
ggaatgacaatcttggaagacgatgttgctaatggagatatggagctaactgtttctttg
ctctggaacatgtttgttcacttgcagttgcctcttctgctcaacaaaacaaccttagca
aatgaaattttgaaaattcacggagttaacatggactccgctaacatcagtcctggttcc
tctcctttggagttgcttttgagttggattcaggcagtttgtggaaaatatgataataaa
attgataattttgcttcgttggttgacggtaaagccatatggtgtttgcttgactactat
ttccgtaaagaactttcttgttctcattctccaaaggatcctcatgaaagtagaagagaa
gaatcacttatgtcagctattgattatacagattcagtccacaatttcttattgtcacag
aagcttacaacattactgtggaattttcctgaggttcttcatatcagtgacattcttgaa
catagtggcgcaattaatcatcgaagtgtggtaattttattggtgttcctctcatcacaa
ctgactgtaaagaaaaccatggatcaactgaatttccataaactattgtgttgtgattgt
caagagaggagaacttcaagcgttggtaggtgttctttaagttcagaagcagagctggac
caagacataatagatggctccagtacagaagatgctgctagaaagtttagggctattaag
gcttggtggcaagatatggcggaacgaaacaacaaattcatcacacaacctggtacttct
gttttggattgcaactcaactagcaatctgggcatcatcagtcaaagagaaaatgctgca
aaagtaatacaatcgcactttaggagatcagttgaacgccataactttttgaagatgaga
agagcggcttcctttttgcaaactgctattcgggcttggttaatggtgaagaagagacca
ttccttttaaaattcagtagtgtcacggttcaggattttagatgtgaaaggtggagccag
gctgaaaatctagggagatatgtgaagttcattgttgaccggcatagatttgtcaagcta
cgaagagatgttatgcttattcagaaagccacgaggatttggatcagacaaagacataaa
agtgattgtgttggtaatcttgatgtatccactcttgatatagtcaatgctgccattgct
gttcagaaattcattcgtggttgggcagcaaggtctaggtataaggatgttcaattggaa
aaggcttcatccacgtgccaatttgatggtctaacagttcagctttcttcaaagactata
atttccaggtccatccacgaacagcagcttgctgctactaaaattcaaattcatttccaa
ggttggctgttgagaaggacatttttaatccggaagcaagctataatgaaaattcaaagt
aattatagatgcttaagatgtcggagggcttttcaacaattttgtattgctaaaaagtca
gccattgttattcagtcttgtgttcgtggatggattgtaaggagaaaagtgggaagatat
cggtatctcattggtgtgcttcaaagatactgccgggcttggctaataaggagggacttt
ttgttccaaaaacaagcagcaacacagattcaaagtgctattcgatgtttaaactgcagg
acagcatttaagtcttgcaaagatgctacgattgaaattcaacggtttgtcaggggacat
actactcggaataggctattaggggcttctcacttttctggaggcattgctagttacgga
aattttctaacctcaggagtctgctttcagagcttgaaactgaaagtaatgatgtcttca
gttttgaagctacaaaggtggtggagaggcattctatttcttaaactcagaacaaagtct
gcaattgttatacaagctcatattcgaggttggattggcaggcaaatggcctctagagag
aggcaatgtgttgctctccaaagagaagcagtgttaaaaatccaaagtgctgttcgatgt
ttgaactgctggaaggcgtttcattgctgtaaacaagctgctatagagattcaggggttt
gtcagaggggagattactcgaaataggctattaggggcttctcactttcatagagctact
gctagttattgcaaaatgcaaacctcaagagtctgcttgcagagtttggaattgaaaata
gtgatgtcttctattctgaagctgcaaaggtggtggagaggtgttttgttgctgaagcat
agagcaaaatcagcaatcctcgtacagtctcatgttcgaggttggattggcaggaaaaag
gcctctagagagaggcagcgcgttgtagtggttcaatcgcactggaaaggtttccttgca
cgtaaaaatgctagagggcagctcctggatttgcgcctgagaatgcaaaattctgctaaa
aatgtggatgacagcatgcgtattattaacaggctcatagtggctctttcagaactatca
agcatgaaaagtgttagtggcattcttcacacttgtgcaactttggatatgactacagaa
cactctcaaaaatgttgtgagaaacttgtggctgctggggcaattgacaacttactgaag
ctgattcgctcagtcagtcaaagcatgcctgaccaggaggttttaaagcatgcactctca
gttctccggaatcttgcccgttatccacatttgattgaagtgcttattgacagtcaagga
gtagtagaaataattctttggcaattgctcaggaacaaggaggaaggatatttcattgct
tctgaggttatgaagaagatctgttcacatcaaaaaggcgttgaaatggtgctgaggaaa
ccacccattataaagaggctacacagtcttgtggaagaattaacaaggaaggcaaacttc
gagaagaagaaacctcgcggcatggcagtgagggacaacatggaaagaagattacgggag
gccgtcgaacttttgaaactgataaatagcaaactttggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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