KEGG   Populus trichocarpa (black cottonwood): 7459906
Entry
7459906           CDS       T01077                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
  KO
K11855  ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pop01002]
    7459906
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7459906
Enzymes [BR:pop01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     7459906
Peptidases and inhibitors [BR:pop01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   7459906
Ubiquitin system [BR:pop04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    7459906
SSDB
Motif
Pfam: UCH UCH_1 zf-MYND HNH_5 Ecl1 zf_UBZ
Other DBs
NCBI-GeneID: 7459906
NCBI-ProteinID: XP_024460208
Position
6:26389931..26396276
AA seq 633 aa
MHVGGITVDLNWLLQFIFTVFVIGLGLLHLVKNTASKYFEVGANFEAAESSHTAIDPNII
NQAVEAEEDSSICGNCGGFGTKKCSRCKSVRYCSQRCQEADWKAGHKLKCKDFKLNSSQT
VRSNFGFKPSGGGSRSFSNAALVPANGVSNSKPIKKPGKVLFPYDEFIKLYNSDKPEFSP
CGLLNCGNSCFANVVLQCLTYTRPLVAYLLKKGHQTECRHNDWCFLCEFQSHVERASQST
LPFSPINIISRLPNIGGNLGYGRQEDAHEFMRLAIDTMQSVCLDEFGGEKAVEPASQETT
IIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAASLEECLDQFTDKEWLHGEN
MYKCDRCNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFPEMLDLSPYMSEG
GDGTDVYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDCKVSSVELDEVLSQGAY
MLVYSRVSVRPSCLRTIEPSKEQQSIVKVELDSCTENPVEHLSPIESMDATNSGFPAPEN
VNSEVGSEHPESGTGNEDHDDMIGVDYCSSLSIPVEVSGLKKDSAAALDSEAVVIEHSLD
YTDTVMSESDSAVAKDIQVNGSIYSFSSEEIST
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgcatgtcggtggaataacagtggatctgaattggttactacaatttatattcactgtt
tttgtaattggtttggggttgttacacctcgttaagaatacggcgtccaagtatttcgaa
gtcggcgctaatttcgaagcagctgagagtagccacactgctattgatccaaatattatt
aatcaagccgtggaagctgaagaggactctagtatctgtggaaattgtggcggtttcggg
actaaaaagtgttctcgttgcaaatccgtgagatattgctcacagagatgccaagaagca
gactggaaggctggccataagttaaaatgcaaggatttcaaattaaattcttcacaaaca
gtaagatcaaactttggttttaaaccttcaggtggtgggagtagaagcttttctaacgct
gcacttgttcctgccaatggggtttctaactccaagcctataaagaagccaggaaaggtt
cttttcccgtatgatgagttcattaaactttacaactcagacaagcccgaattctctccc
tgtgggctcttaaattgtggaaacagttgctttgccaacgtggttttacaatgcctcaca
tacacaaggccacttgttgcatatttgttgaagaaaggtcatcaaacagaatgtagacat
aatgattggtgttttctttgtgaattccaatcccatgttgaaagagcaagccaaagcacg
cttcccttttcaccaataaatattatttctcggttacctaatattggtggtaatcttggc
tatggaagacaggaggatgctcatgagttcatgaggcttgctattgatactatgcaatca
gtatgccttgatgaatttggtggagaaaaggctgttgaacctgcctctcaagagactaca
ataattcaacacatatttgggggtcgcctccaatctcaggtgatatgcacaaaatgcaat
aagatttcaaatcagtttgagaacatgatggatttaactgttgagattcatggtgatgct
gcatccttggaggaatgcctcgatcaattcacagacaaagagtggcttcatggagaaaat
atgtacaaatgtgacaggtgcaatgactatgtcaaggcatggaagcgtcttaccattcaa
cgagctccaaatgttcttacaatcgctttaaagagattccagagtgggaggtttggtaaa
cttaacaaaagggtaacttttcctgagatgttagatctgagcccctacatgagtgaagga
ggagatggcactgatgtgtacaagctttatgcagttgttgtccatgtggatatgctaaat
gcatcattttttggtcattacatctgctacaccaaggatttccatggaaactggcacaga
attgatgactgcaaggtttctagtgttgaattagacgaggtactttctcagggcgcatat
atgcttgtgtacagcagggtttctgttcgaccatcatgtctcagaaccattgagccttca
aaggagcagcaatcaatcgtgaaagtagaactagattcttgcacagagaacccagttgaa
cacctttcaccaatagagtcgatggatgccacaaattctgggttcccagcacctgaaaat
gtaaattctgaagttggaagtgaacatcccgagtcagggactggtaatgaagatcatgac
gatatgattggagttgattactgctcaagtttatccattccagtggaggtttctggcctc
aagaaggattccgctgctgcacttgattcagaagctgttgtgatagagcactccttggac
tatacagatacagtcatgtctgaatcagattctgccgttgcgaaggatatccaagtaaat
ggcagtatttattcattctcgagtgaagagatttcaacataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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