KEGG   Populus trichocarpa (black cottonwood): 7460526
Entry
7460526           CDS       T01077                                 
Name
(RefSeq) probable pectate lyase 8
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00040  Pentose and glucuronate interconversions
pop01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    7460526
Enzymes [BR:pop01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     7460526
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 7460526
NCBI-ProteinID: XP_002297822
UniProt: A9PIK2
Position
1:3962259..3967625
AA seq 506 aa
MLARYCMGGSIKRSFCGSFKLRLYTWFFSLSLNFFLTISLHHQIFLQREKEREKLTMAVS
RKWACMFSAVLLLLFVGVMPTTSGTNGGISALTRSVETEKVQSSSNTTMAARSQEEADAL
NEKAVADNPEEVVSMVEMSIRNSTERRRLGYFSCGTGNPIDDCWRCDPNWQKNRKRLADC
GIGFGRNAIGGRDGRFYVVTDPSDNDPVNPRPGTLRHAVIQDAPLWIVFKRDMVIQLKQE
LIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR
TMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD
SYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG
NRYNAPVNPFAKEVTKRVDTAAGYWKNWNWRSEGDLLLNGAYFTPSGAGASSSYARASSL
GAKSSSMVGAMTANAGALGCRRARQC
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgttggcaaggtactgcatgggtgggtctataaaaaggtcgttttgtgggagctttaaa
ctccgactctacacttggttcttctctctctctctcaacttttttttaactatttctctg
catcatcaaatctttctacagagagagaaagaaagagagaaattgacaatggcggtgtct
aggaaatgggcttgtatgttttctgctgtgcttctgttgttgttcgttggtgtaatgcct
actacttcaggaaccaatggtgggatctctgctcttaccaggagtgtggaaacagagaag
gtacagagctcaagcaacacaactatggcggccaggtctcaagaagaggcggatgcatta
aatgagaaagcagttgccgataaccctgaagaggttgtttcaatggttgagatgagcatc
cgcaacagtactgaaaggaggagacttggttacttctcttgtggaacaggcaatcctatt
gatgattgctggcgttgtgaccccaactggcagaagaaccgcaagcgccttgctgactgt
ggcattggttttggaagaaatgctattggtggccgtgatggtcgcttctatgttgttact
gatcctagtgataatgaccctgtgaacccaaggcctggtactttgcgccatgctgtgatc
caggacgctcctctatggattgtgttcaaaagggacatggtgattcaattgaagcaggaa
cttatcatgaacagctttaagacaattgacggccgtggggtcaatgttcacatcgctaat
ggagggtgcattaccatccaatttgttaccaatgtgatcattcatggattacacattcat
gattgcaagcccactggcaatgctatggtgcggagctcgccttctcactacggatggagg
acaatggctgatggtgatgccgtatctatttttggttcaagccacatttgggttgatcac
aattcgctttctaattgcgctgatggtctggttgatgctgtcatgggttctactgccatt
accgtctccaacaaccacttcacccaccataatgaggtaatgctattgggccatagtgac
tcttacaccagagacaagcaaatgcaagtgaccattgcgtacaaccattttggagaggga
ctgatccagagaatgccaaggtgtagacacgggtacttccatgtggtgaacaatgattac
actcactgggaaatgtatgccatcggtggcagtgcagaacccaccatcaacagccagggc
aacagatataatgctccagtcaacccttttgcaaaggaggtgacaaagagggtagataca
gccgcgggctattggaaaaactggaattggaggtcagagggagacctgctgctgaatggt
gcttacttcactccatctggagctggagcttcgtctagctatgctcgcgcttcaagcttg
ggtgccaagtcttcttccatggtcggggcaatgactgctaatgctggtgctcttggctgc
cgcagggcccgccagtgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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