KEGG   Populus trichocarpa (black cottonwood): 7464518
Entry
7464518           CDS       T01077                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03010  Ribosome
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    7464518
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    7464518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pop03011]
    7464518
   04121 Ubiquitin system [BR:pop04121]
    7464518
Ribosome [BR:pop03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    7464518
  Archaea
    7464518
Ubiquitin system [BR:pop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   7464518
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 zf-C4pol Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Plexin_RBD Dsc3_N DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 7464518
NCBI-ProteinID: XP_002321972
UniProt: A9PC21
Position
15:complement(427485..429650)
AA seq 128 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctgactggcaagaccatcactcttgaggtcgaatctagt
gatactattgacaatgtcaaagccaaaatccaggacaaggaagggattcctcctgatcag
cagagactgatctttgctgggaagcagctggaagatggccgtacccttgctgattacaat
atccagaaggagtcaacactgcatctggttctgaggcttcgtggtggcattattgagcca
tctttgatggctttggccaggaaatataaccaggaaaagatgatttgccgcaaatgttat
gcacgcctccatcctcgtgctgtcaactgcaggaagaagaagtgtggccacagcaaccag
ttgaggccaaagaagaagattaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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