KEGG   Populus trichocarpa (black cottonwood): 7465852
Entry
7465852           CDS       T01077                                 
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04145  Phagosome
pop04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    7465852
  09142 Cell motility
   04814 Motor proteins
    7465852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pop03036]
    7465852
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    7465852
   04147 Exosome [BR:pop04147]
    7465852
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     7465852
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    7465852
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   7465852
  Exosomal proteins of colorectal cancer cells
   7465852
  Exosomal proteins of bladder cancer cells
   7465852
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Tubulin_2 Misat_Tub_SegII
Other DBs
NCBI-GeneID: 7465852
NCBI-ProteinID: XP_002304488
UniProt: B9GWG9
Position
3:complement(14512149..14515145)
AA seq 446 aa
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDSALQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGEYEDEEAYQDED
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagagaaatccttcacatccaaggaggccaatgcggcaaccaaataggagcaaagttt
tgggaagtagtatgtgcagaacacgggattgactcaaccggtcggtatcatggtgactcg
gctctccaactcgagcgagttaatgtttactataatgaagccagctgtggaaggtttgtc
cctcgtgctgttttaatggatcttgaaccgggtactatggatagtgttagatccggtcct
tatggacagatttttagaccggataattttgtgtttggccaatctggtgctggtaacaac
tgggctaaagggcattatacggagggcgcggagttgattgattctgttcttgatgttgtt
aggaaggaggctgagaactgtgactgcttgcaaggatttcaggtatgccactcactgggg
ggtggcacagggtctggaatgggaacactcttgatctcgaaaataagagaggaataccca
gatcgaatgatgctaacattctctgtcttcccatctccaaaggtctcagacactgtcgtt
gagccttacaatgcaactctctctgttcaccagcttgttgagaatgctgatgagtgtatg
gttcttgataatgaggctctttatgatatctgcttccgtactctcaagctcacaactccc
agctttggggatctgaaccacctgatttcagccaccatgagtggtgttacatgctgcctt
cgtttccctggtcagctcaattcagaccttcgcaaacttgctgtgaacctcatcccattc
ccccgtcttcactttttcatggttggctttgcacctctcacatcccgtggctcacagcaa
taccgtgccctaactgtacctgaactcacccaacaaatgtgggatgccaagaatatgatg
tgtgctgctgatcctcgccatggcagatatctcacagcctctgcgatgtttcgtggcaaa
atgagcacgaaggaagttgatgagcagatgatcaacgttcaaaacaagaactcatcctac
tttgttgaatggatccccaacaacgtcaagtccactgtctgtgacattcctcctacaggc
ttgacaatggcttccactttcattggcaactcaacatcaatccaagagatgttcagaaga
gttagtgagcagttcactgccatgttccgcaggaaggctttcttgcattggtacactgga
gagggaatggatgagatggaatttacagaggctgagagcaacatgaatgatttggtctca
gagtaccagcaataccaggacgcaactgctgatgaggaaggcgagtatgaagatgaggaa
gcataccaggacgaggattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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