KEGG   Populus trichocarpa (black cottonwood): 7467445
Entry
7467445           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7467445
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03008  Ribosome biogenesis in eukaryotes
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7467445
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    7467445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    7467445
   03009 Ribosome biogenesis [BR:pop03009]
    7467445
Spliceosome [BR:pop03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    7467445
Ribosome biogenesis [BR:pop03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    7467445
SSDB
Motif
Pfam: Ribosomal_L7Ae PELOTA_1
Other DBs
NCBI-GeneID: 7467445
NCBI-ProteinID: XP_002326012
UniProt: A9P9K1
Position
19:complement(12627738..12629893)
AA seq 128 aa
MTVEAVNPKAYPLADAQLAITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADT
EPLEILLHLPLLAEDKNVPYVFVSSKQALGRACGVTRPVIACSVTTNEGSQLKTQIQQLK
DAIEKLLI
NT seq 387 nt   +upstreamnt  +downstreamnt
atgacagtagaagcagtgaatccaaaagcatacccacttgcagatgcccagttggccata
acaatacttgaccttgttcagcaagctgctaattacaagcaactcaagaaaggagccaat
gaagctaccaagacacttaacagaggtatctctgagtttgttgtgatggctgctgatact
gaaccacttgagattcttctccatcttcctttgcttgctgaagacaagaatgtcccctat
gtatttgtctcttcaaagcaagcacttggccgagcatgcggtgtcacaagacctgtcatt
gcttgttcagtgacaacaaatgaggggagtcaattgaaaacacagattcaacaactcaag
gatgccattgagaaacttctgatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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