KEGG   Populus trichocarpa (black cottonwood): 7469857
Entry
7469857           CDS       T01077                                 
Name
(RefSeq) syntaxin-related protein KNOLLE
  KO
K08486  syntaxin 1B/2/3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    7469857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7469857
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7469857
Membrane trafficking [BR:pop04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    7469857
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   7469857
  Exosomal proteins of other body fluids (saliva and urine)
   7469857
SSDB
Motif
Pfam: Syntaxin SNARE Piezo_RRas_bdg ALIX_LYPXL_bnd T2SSF Prominin DUF5089 Synaptobrevin DUF334 Syntaxin-6_N DUF1942 DUF6584 Syntaxin_2 LarA_C DUF5790
Other DBs
NCBI-GeneID: 7469857
NCBI-ProteinID: XP_002325822
Position
19:complement(4294173..4296001)
AA seq 313 aa
MNDLMTKSFMSYVDLKKEAMKDLEAGPDHDLEMANASNTMDSNLGLFLEEAEDVKKKMRS
IREILDQLQEANEESKSLHKHEALKSIRNKINADIVKGLKKARSIKTQLEEMDRANAANR
RLSGYKEGTPIYRTRVAVTNCLRKKLKELMMDFQALRQKMMIEYKDTVGRRYFTVTGEYP
DEEVIDKIISDGNGGEEFLKRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLLELHQVFL
DMAVMVEAQGEQMDDIEHHVLNASHYVKDGTKELKSAKDHQKSSRKWMCIGIILLLIIIL
VIVIPIVTSFSYS
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaatgacctaatgaccaaatcgtttatgagctatgtggacctaaagaaagaggccatg
aaagatcttgaagcaggccctgaccatgatttagaaatggcaaatgcatcaaacaccatg
gacagcaaccttggtctgttccttgaagaagctgaggatgtaaagaaaaaaatgcgatcg
atccgtgagattcttgaccagttgcaagaagcaaatgaagaaagcaagtccttacacaaa
catgaggccttaaaatcgatacgaaacaaaatcaatgcagatattgttaaaggcctgaaa
aaggccagaagtattaaaacccagcttgaagaaatggatcgtgccaatgctgctaatagg
cgcctttcagggtacaaggaaggaactccgatttatagaacaagggttgctgttactaat
tgcttgcgcaagaaattgaaggagctgatgatggattttcaagctttaaggcaaaaaatg
atgattgagtataaagatactgttggtaggaggtatttcactgttaccggagagtaccca
gatgaggaagtcattgataagatcatctctgatggtaatgggggtgaggagttcttgaaa
cgtgcaatccaggagcatgggaaagggaaggtgttggagactgtggtggagatacaggac
aggtatgatgctgccaaagagattgagaagagcttgttggagctgcaccaggtgtttttg
gacatggcagtgatggtggaggcacaaggggagcagatggatgatattgagcaccatgtg
ttgaatgctagtcactatgtgaaggatggtaccaaagagctcaagagtgctaaagatcac
cagaagagcagcaggaaatggatgtgtatcggtatcattctccttttgataatcattctt
gtgattgttatacctatcgttactagctttagctactcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

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