KEGG   Populus trichocarpa (black cottonwood): 7472490
Entry
7472490           CDS       T01077                                 
Name
(RefSeq) proteasome subunit alpha type-6
  KO
K02730  20S proteasome subunit alpha 1 [EC:3.4.25.1]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03050  Proteasome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    7472490
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pop01002]
    7472490
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pop03051]
    7472490
Enzymes [BR:pop01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     7472490
Peptidases and inhibitors [BR:pop01002]
 Threonine peptidases
  Family T1: proteasome family
   7472490
Proteasome [BR:pop03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    7472490
SSDB
Motif
Pfam: Proteasome Proteasome_A_N FIST_C
Other DBs
NCBI-GeneID: 7472490
NCBI-ProteinID: XP_002323091
UniProt: A9P9I1
Position
16:14283861..14287137
AA seq 246 aa
MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAASTTSIGVRGSDSVCVVTQKKVPDKL
LDQTSVTHLFPITKFLGLLATGITADARNLVQQARNEAAEFRFRYGYEMPVDALARWIAD
KSQVYTQHAYMRPLGVVAMILGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLE
KKMKNDPALSYEETVQTAISALQSVLQEDFKATEIEVGVVRTGDCVFRVLSTEEIDEHLT
AISERD
NT seq 741 nt   +upstreamnt  +downstreamnt
atgagcagaggaagcggagctggatatgatcggcatatcaccatattctcccctgaaggc
cgcctctttcaagtcgagtatgcgttcaaggcagtgaaggcagcttccaccacttccatt
ggagttcgtggcagcgattctgtatgtgttgttactcaaaagaaggttccggacaagctt
ttggatcagactagtgttactcaccttttccctattaccaagttccttggattactggcc
accggcattactgctgatgcaaggaatttagtgcaacaagcaaggaatgaagcggcggag
tttaggtttagatatgggtatgaaatgcctgtggatgcattagccagatggatagcagac
aaatcgcaagtttatacacagcatgcatatatgagacctcttggagtagttgctatgatt
ttgggtattgatgaagagaacgggcctcagctttacaagtgtgatccagctggccacttt
tatggtcacaaggctacaagtgctggattgaaagaacaagaggctatcaatttcctggaa
aagaaaatgaaaaatgaccctgctctctcctatgaggaaactgtgcagactgctatttct
gctctgcaatctgttctccaagaggatttcaaggctactgagatagaggtgggagttgtg
agaacaggtgactgtgtttttagagtgctgtccactgaggaaattgatgaacatttaact
gctatcagtgaacgtgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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