KEGG   Populus trichocarpa (black cottonwood): 7474543
Entry
7474543           CDS       T01077                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7474543
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    7474543
Spliceosome [BR:pop03041]
 Complex A
  U2 snRNP components
   U2 related factors
    7474543
 Complex B
    7474543
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 7474543
NCBI-ProteinID: XP_024451285
Position
2:187496..190878
AA seq 273 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRGNGRRNDKYDR
EGGRKRHGSTVREGSEERRARIEQWNREREEKQ
NT seq 822 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcttcaatcttcggtactgagaaagaccgagttaattgtcctttc
tacttcaagattggcgcatgccgtcacggcgatcgatgctctcgcctccacaaccgcccc
accatctctcccactctcttattatccaacatgtaccagcgtcctgacatgattactcct
ggcgtcgatgctcaaggtcagccacttgacccgcacaagatccaggagcattttgaagaa
ttttacgaggatatttttgaagaactgaacaaatttggcgagatcgagagcctcaatgtt
tgtgataatctcgctgatcacatgatcggtaacgtttatgttctgttcaaggaggaagac
caagctgcagccgctttgcaagctcttcaaggacgattttactctggtcgcccaatcatt
gctgatttctctcccgtcactgattttcgtgaagctacctgcaggcagtttgaggagaat
aactgcaatcgtggcggttattgtaattttatgcacgtgaagctgattgggagggatttg
cggagaaagttgtttggaagatatcgtggatatagggttagtaggagtcggagtaggagt
gtgagtcctaggaagagggagagagattatgataggcgtgagagggattacagggacaga
gatcgagacagagaccgtgattatcgtggaaatgggaggaggaatgacaagtatgacaga
gagggagggagaaaaagacatgggagtacagttagggaaggcagtgaggaacgaagggct
aggattgagcaatggaatagagagagggaggagaaacaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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