KEGG   Populus trichocarpa (black cottonwood): 7475094
Entry
7475094           CDS       T01077                                 
Name
(RefSeq) nuclear pore complex protein NUP35
  KO
K14313  nuclear pore complex protein Nup53
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    7475094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7475094
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     7475094
SSDB
Motif
Pfam: Nup35_RRM Nup35_RRM_2 YbjQ_1
Other DBs
NCBI-GeneID: 7475094
NCBI-ProteinID: XP_002299732
UniProt: B9GGL5
Position
1:complement(16850436..16854875)
AA seq 329 aa
MSLVNKSSGRQSLFFQDLASPVSAGKGKFSTPAQAAAVSALWRDNFGGSDLPPPPFYTLE
DRSEISPESGIPDYPLSPDIKSHPTTSPFQSSGREFGTPPKTKSEATTSFALISGQNTQQ
GSPISTWWSPSKARSSEHEDKGKGSPVEGVVQPGALITLPPPREVARPEKHRNCVPAGNL
DEEEWVTVYGFAPGDTNLVLREFEKCGVILKHVPGPREANWMHILYQSRADAQKALSKNG
MQINGVLIIGVKLVDPMQRQALNERINNQGFMTLPPPSSTRTPDSNALRASPRPHYLQNG
STSARQSGGVIASPAKSMVSKIFDVMFGI
NT seq 990 nt   +upstreamnt  +downstreamnt
atgagtttagtgaataaatcctctgggaggcaatccttgtttttccaagatttggcatca
cctgtttctgctggtaaagggaagttctcgactccagctcaggctgctgctgtatctgct
ctatggcgtgacaattttgggggttccgatcttcctccccctcccttttacaccttggag
gaccgttcggaaatctctcccgagtctgggattcctgattaccctttatctcctgacatc
aaatctcaccctacaacatctccatttcagtcttctgggagggagtttggtactccccca
aaaaccaaatccgaggctactacttcctttgctttgatcagtgggcagaacactcaacag
ggttctccgatttcgacttggtggtcaccatcaaaagctagaagcagcgaacacgaagac
aaaggtaaaggttctccagttgagggtgtcgtccaacctggtgctttaatcacacttcca
ccgcctcgagaagttgcaagaccggagaagcataggaactgcgtgcctgcgggtaacctt
gacgaggaagaatgggttactgtttatggatttgctccgggtgataccaatttagtgtta
cgggagtttgaaaaatgcggtgtgatcttgaaacatgttcctggtccaagggaagctaac
tggatgcacattctctatcagagtcgagctgatgctcagaaggctcttagcaagaatggg
atgcaaatcaacggagtactaatcattggtgtgaagctagtggatccaatgcaacgccag
gctttgaacgaaagaattaacaatcagggattcatgaccttacccccaccatcatcgact
agaaccccagattcaaacgcattaagagcctctcctcgcccccactatcttcaaaatggc
agcaccagtgcccggcagtcaggaggtgtgattgcttccccagcgaagtccatggtatcc
aaaatctttgatgttatgtttggcatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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