KEGG   Populus trichocarpa (black cottonwood): 7475427
Entry
7475427           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7475427
  KO
K08497  protein transport protein SEC20
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    7475427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7475427
Membrane trafficking [BR:pop04131]
 SNARE
  SNAP-25[N] (Qb)
   Sec20
    7475427
SSDB
Motif
Pfam: Sec20 DUF1687 MCH DUF2408 Elongin_A
Other DBs
NCBI-GeneID: 7475427
NCBI-ProteinID: XP_002314511
UniProt: A9PBC7
Position
10:complement(9348309..9351074)
AA seq 300 aa
MDEVVEAVEKAKKEWEETYSKAQQHMKAIQDYDAISSSSSSSVSLPRLNGLAQDCLALLQ
SLQFQLDLLAPQLPTDDQLKSALRLLDSWKQLYHDLRASLRNANLQAKANMRKAAQQERE
LLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERSTGTLMTFEESTTV
LRKAETEYKGHRSLLSRTRNLLSTMQRQDVLDRVILAVGFFLFSCAVLYVVSKRIGVLAL
QRKVTAALKAGMAGKGAIKARAVEDAIPRVIEDGIDVAQVLDNAVPKVEVPVEQAMHDEL
NT seq 903 nt   +upstreamnt  +downstreamnt
atggatgaggtagtggaggcagtggagaaggcgaagaaagaatgggaagagacgtattct
aaagcacaacaacacatgaaagcaattcaagattacgacgccatatcttcttcttcttct
tcttctgtttctcttccgagattgaatggcttggcacaagattgtttagctttgcttcaa
tccttgcagttccagctcgatctccttgctcctcaattgcctaccgatgatcaactcaaa
tccgccctccgattacttgattcctggaaacagctttaccatgatttgcgggcgagtttg
agaaatgctaatctgcaagccaaggctaacatgagaaaagctgctcaacaagagagagag
cttcttcttggtggtggagaagagtccactattcgcaggcgaaatttgcagacaaaggct
gggatgacatccgctgcagaaagcatcacggagagccttcgcagaactcgtcagctaatg
gttcaggaggttgaaagaagtactggcactctcatgacttttgaggaatcaacaacagta
ttaaggaaggctgaaacagaatataagggtcatcgctcattgttatcgcgaactcgcaat
cttctctctacgatgcaacgtcaggatgttcttgacagggtgatactggcagtaggattt
ttcttgttttcatgtgctgttctttatgttgtttccaagcgcattggcgtacttgcattg
cagagaaaggttactgctgccttaaaagccggtatggccggaaaaggagccatcaaagcc
agagctgttgaagatgctatacccagagttattgaagatggtattgatgttgctcaggtc
ctggacaatgcagttcccaaggtggaagtacctgtagaacaagccatgcatgatgaactt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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