KEGG T01077: 7477619

Populus trichocarpa (black cottonwood): 7477619

Entry

7477619           CDS       T01077

Name

(RefSeq) tubby-like F-box protein 5 isoform X1

K19600

tubby and related proteins

Organism

pop Populus trichocarpa (black cottonwood)

Brite

KEGG Orthology (KO) [BR:pop00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pop03037]
    7477619
   04990 Domain-containing proteins not elsewhere classified [BR:pop04990]
    7477619
Cilium and associated proteins [BR:pop03037]
Primary cilia and associated proteins
  Other primary cilia associated proteins
   7477619
Domain-containing proteins not elsewhere classified [BR:pop04990]
Other domain-containing proteins
  Tubby family proteins
   7477619

SSDB

Motif

Pfam:

Tub F-box-like F-box DUF3527

Other DBs

NCBI-GeneID:

7477619

NCBI-ProteinID:

XP_002307662

UniProt:

B9H4C5

Position

5:complement(22836393..22838832)

AA seq 416 aa
MSFKSKLKEIRDDITTTFSMGKLQRNRTNRRGRAYIAPELGGGSELLSELIEEQSPWANL
PPELLQDVIKRVEGSETSWPGRRDVVACASVCTSWREITKAVVKTPEQCGCITFPISLKQ
PGPRDAPIQCFIKRERATSTYHLYLGLSPALSGDMSKLLLAAKKIRKATSTDFRISFVGS
DFCQTSNTYAGKLRSNFLGTKFTIYDSQPPCPGLKSNCKLQQKVRSIQVSPGVPARNFNV
ATVSYELNVLRTRGPRRMHCIVHSIPISAIQEGGVAPTPLEFNNPGDEQSPSLSASKIKQ
PLIDFISTSRAESSDSICSKMDPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVA
AVEPCQNVPVEEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE

NT seq 1251 nt +upstreamnt +downstreamnt
atgtcatttaagagcaagttaaaggagattagagatgatatcactactacattttcgatg
ggaaagttacagaggaacagaacaaatcgaagagggagagcttatattgcacctgaatta
ggaggtgggtctgagctattaagcgagttgattgaagaacagagtccatgggctaatttg
ccaccagagttgctacaagatgtgattaagagagttgagggtagtgaaacttcatggcct
ggaagaagagatgttgttgcttgcgcttcagtttgtacgtcttggagagagattactaaa
gctgttgttaagaccccagaacagtgtggttgcattactttccctatctcgctaaagcag
cctgggccgagagatgctccaattcaatgctttattaagagggaaagggctacttctact
tatcatttgtatcttggtctcagtcctgctttgtcaggtgatatgagtaaattattatta
gcagcaaagaagattagaaaggctacaagcacagattttcggatatcatttgttggaagt
gatttctgtcaaaccagcaatacctatgctggaaagctgaggtctaatttcctgggaacc
aaattcaccatttatgacagtcagcctccatgtcctggactgaagtccaattgcaagctt
cagcagaaagtccgttccatccaagtgtctccaggggtacctgctagaaactttaatgtg
gccactgtatcttatgagcttaatgtcctacggacccggggtccaaggagaatgcattgc
atcgtccactcaatccctatttctgcaattcaagaagggggagtagcccctactccattg
gaattcaataatcctggtgatgagcaatctccttcattgtctgcctcaaaaataaagcaa
ccacttatcgatttcatctccactagccgtgctgagtcatctgattcaatttgcagcaaa
atggatcccctggttttgaaaaataaagctcctagatggcacgagcagcttcagtgttgg
tgtctaaattttaaagggcgtgttacagtggcctctgtgaagaatttccagttggtggca
gctgtggagccttgtcaaaatgttcctgtagaagaacaagaaaaagttattcttcagttt
ggaaagatcgggaaagatatcttcaccatggattatcgataccccctctctgccttccaa
gcttttgcaatctgcttgagtagctttgacactaaaccagcttgtgaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system