KEGG   Populus trichocarpa (black cottonwood): 7484720
Entry
7484720           CDS       T01077                                 
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A
  KO
K12819  pre-mRNA-processing factor SLU7
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7484720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    7484720
Spliceosome [BR:pop03041]
 Complex C
  Other components
   Step II factors
    7484720
SSDB
Motif
Pfam: Slu7 zf-CCHC_4 Tudor_3
Other DBs
NCBI-GeneID: 7484720
NCBI-ProteinID: XP_002318579
UniProt: B9I2T5
Position
12:complement(7676677..7680987)
AA seq 536 aa
MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKP
SLKHQRKWKSDPNYTKSWYDRGAKVFQAEKYRKGACINCGAMTHDAKSCVERPRKVGAKW
TNTHIAPDEKIETIELDYDGKRDRWNGYDPSSYAHVVERYEARDAARRKHMKEQQLKKLE
EKNGNQNVEDGVSDVDNDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVDSAHYDPKTRSMREDPLPDADPNEKFYGGDNRYRNSGQALEFKHLNI
HAWEAFDKGQDIHMQAAPSQAELLYKNHKVIKDKLKTRTKDTIMEKYGNAASEEEIPREL
LLGQSERQVEYDRAGRIIKGQETVLPRSKYEEDVFINNHTTVWGSWWKDHQWGYKCCKQM
IRNSYCTGAAGIKAAEAATDLMKTNIDRKEATEEAPAPVEERRLATWGTEVPEDLVLDEK
LLAEALRKEDQRKREEKDERKRKYNVRWNDEVTTEDMEAYRMKKVHHDDPMKDFLH
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggcaaccgcatcagttgcatttaagtctagagaggaccataggaagcagattgaattg
gaagaagcgcgtaaagctgggcttgcccctgctgaggttgatgaagatggaaaggagatt
aatcctcatattcctcagtatatgtcatctgcaccttggtatcttaatgccgagaaacct
agcttgaaacatcaaaggaagtggaaatcagatcctaattatacaaaatcatggtatgac
agaggtgccaaagttttccaggccgaaaaatatagaaagggtgcatgcatcaactgtgga
gcaatgacacatgatgcaaagtcatgtgttgaaaggcccaggaaagttggtgcaaagtgg
actaacacacatatagcccctgatgaaaaaatagagacgattgagcttgattatgatggc
aagcgagaccggtggaatggttatgacccatcaagctatgctcatgttgttgaaagatat
gaagctcgagatgcagctcgaaggaagcacatgaaggaacaacaacttaagaaattggag
gagaaaaatggaaatcaaaatgttgaggatggtgttagcgatgtggacaatgatgaggat
gatttaagggtagatgaagccaaggttgatgagagcaaacaaatggactttgcaaaggtt
gagaagcgtgtgcgaacaacaggtggtgggagcacaggaactgttaggaatttacgtatt
cgcgaggacacagcaaaatatcttttaaatcttgatgttgactctgcccactatgacccc
aaaacccgctctatgcgtgaggatcctcttccagatgcggatccaaatgaaaaattctat
gggggagataaccgatatagaaatagtggtcaagcattggagttcaagcatctcaacatc
catgcttgggaggcatttgacaagggacaagatattcacatgcaagcagctccatcacaa
gctgagttgctatataaaaatcataaggtcataaaagataagttgaagacccgaacaaag
gacactattatggagaagtatggcaatgcggctagtgaagaggaaattccaagagagctt
ctattgggccagagtgaaagacaagttgaatatgatcgtgctgggcggattatcaaggga
caggagactgtgcttcctagaagcaagtatgaagaagatgttttcattaataatcacaca
accgtgtggggatcatggtggaaggatcatcaatggggctacaagtgctgcaagcagatg
attcggaacagttattgcacgggtgctgctggaataaaggctgctgaggctgcaactgat
cttatgaagactaatattgatcgtaaagaggcaactgaagaggcacctgcaccagtggag
gagagaaggcttgctacctggggaaccgaggttccagaagatttggttttggatgaaaag
ttacttgctgaagcgcttagaaaggaagatcaaagaaagagagaggagaaggatgagagg
aagcggaaatacaatgtcaggtggaatgatgaggttactactgaggatatggaggcatat
aggatgaagaaagtacatcatgatgacccaatgaaggatttcctccattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system