KEGG   Populus trichocarpa (black cottonwood): 7495848
Entry
7495848           CDS       T01077                                 
Name
(RefSeq) probable methionine--tRNA ligase isoform X1
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00450  Selenocompound metabolism
pop00970  Aminoacyl-tRNA biosynthesis
pop01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    7495848
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    7495848
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pop01007]
    7495848
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pop03016]
    7495848
Enzymes [BR:pop01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     7495848
Amino acid related enzymes [BR:pop01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   7495848
Transfer RNA biogenesis [BR:pop03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    7495848
 Prokaryotic type
   Other AARSs
    7495848
SSDB
Motif
Pfam: tRNA-synt_1g tRNA_bind Anticodon_3 tRNA-synt_1 Anticodon_1 tRNA-synt_1e CoV_peptidase Sublancin
Other DBs
NCBI-GeneID: 7495848
NCBI-ProteinID: XP_024443810
Position
1:complement(32759533..32765810)
AA seq 800 aa
MEDLNRTAPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIY
ICGTDEYGTATETKAMEENSTPKQICDKYYAIHREVYKWFNISFDEFGRTSSPQQTEICQ
AIFKKLLENNWLSENSMQQLYCDTCERFLADRLVEGNCPTEGCNYDSARGDQCENCGKLL
NPTELINPRCKQCKNTPRIRDTNHLFLELPLLKDKLVHYIESTSVAGGWSQNAIQTTNAW
LKEGLKPRCITRDLKWGVPVPLEEFKDKVFYVWFDAPIGYVSITSCYTPDWEKWWKNPEN
VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN
DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWSDLQAKSNNELLNNLGNFINRVLSFLAKPP
GSGYGSVIPDAPGAGSHPLTNKLAEEVGKYVEQYLEAMEKVKLKHGLKTAMSISSEGNAY
LQESQFWRLYKEDQPSCSIVIKTSLGLVYLLACLLEPFMPSFSVEVFKQLNMPPEQASLC
DEKGDMDKAKRPWEILPAGHKIGTPEPLFKELKIEEVEDYRKKFAGSQADRLEREEVEKA
SKLAEELKKKATVGGKKQQTKKPAGEAKSRGAVEPEISITRLDIRVGLIKKAQKHPDADS
LYVEEIDLGEGDCRTVVSGLVKYIPLEEMQNRKVCILCNLKPANMRGIKSEAMVLAASSS
DHTKVELVDPPQSAVVGERVTFPGFEGEPDDVLNPKKKVWETLQVDLQTNSDLVACYKDI
PLTTSAGVCKVATINNGSIR
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggaagatctcaatcggacggccccgaagctacctatcccgggaaagcgaaacatactg
ataaccagtgctttgccttatgtcaataacgtccctcatctcgggaacatcatcggctgt
gtgttgagtgctgatgtttttgctcgatactgtcgtcttcgaggatataacgcgatttat
atttgtggaactgacgagtatgggactgcgactgagactaaagccatggaggagaattcc
actcctaaacaaatttgtgacaagtattatgcgattcatagggaggtttataaatggttt
aatataagttttgatgaatttggacgtacgtcgagtccgcagcaaacggaaatttgtcaa
gcaatttttaagaaattgttagagaataactggctttcggagaactcaatgcaacagctg
tactgtgatacatgcgaaagattcttagctgatcgacttgtggaaggtaattgtccaacg
gaaggatgtaattatgattctgcacgaggagatcagtgtgaaaattgtggaaagcttttg
aatcctacagagttaataaatcccaggtgcaagcaatgtaaaaacacaccacgaatccgt
gatacaaatcacttgtttcttgagcttcctctactgaaggataaattagtacactatatc
gagagcacatctgtagctgggggctggagccaaaatgctattcaaacaacaaatgcatgg
cttaaagaaggattaaaaccacgatgcattactagggatctgaagtggggtgttcccgtt
ccacttgaagaatttaaggacaaggtgttctatgtttggtttgatgctcctattggatat
gtctccattacttcttgctacactcctgattgggagaagtggtggaagaatcctgagaat
gttgagctgtatcagtttatgggaaaagacaatgtgccattccacactgtgatgtttcct
tctacgcttcttggaacaggtgaaaattggactttgatgaagactataagtgtaactgaa
tacttaaattatgaagcaggaaagttttccaagagtaaaggtgtaggagtgtttggtaat
gatgcaaaggatacaaatattcctgtagaagtttggagatattatttgctaaccaatagg
cctgaggtgtctgacacactatttacatggtctgatttgcaagcaaaaagtaacaatgag
ttgctgaataatttgggcaactttattaaccgagttctgagctttcttgctaaacctcca
ggttcaggatatggttctgttatcccagatgctccaggtgcaggctctcatcccctgaca
aataaattggctgaagaagttggtaaatatgtggagcaatacctggaagccatggaaaag
gttaaattaaagcacggattgaaaaccgcaatgagcatttctagtgagggaaatgcatat
ctgcaagaaagccaattctggaggctttacaaggaagaccaaccttcttgttctatagtt
ataaagacttcattgggtctagtatatcttctcgcatgtttgttagaacctttcatgcca
tctttctctgttgaggtcttcaagcagcttaatatgccccctgaacaagcttcactatgt
gatgagaaaggtgatatggataaggcaaaaagaccctgggagatcctacctgctgggcac
aagattgggacaccagagcccttgttcaaggaactgaaaatagaagaagtggaggactac
aggaagaaatttgctggaagtcaggctgacagacttgagcgggaagaagttgaaaaggca
tctaagcttgctgaggaactgaagaaaaaagctacagttggtgggaagaagcagcagacc
aaaaaacctgctggtgaagccaaatcaaggggcgctgttgaaccagaaatctccatcaca
agacttgatattcgtgttggcctaattaagaaagctcagaagcatcctgatgctgattcc
ctgtatgtggaagaaatcgacttgggtgaaggagactgtagaacggttgtaagtggactt
gtcaagtatatacctcttgaggagatgcagaatcggaaggtctgcatcctttgcaaccta
aagcctgcaaatatgaggggcatcaagtcagaggctatggttctcgctgcttccagtagt
gaccacaccaaggttgaattggttgatccaccccaatctgccgttgttggagagagagtg
acattcccagggtttgaaggagaacctgacgatgtcctaaaccctaagaagaaagtctgg
gagacactacaggtggatctgcaaactaacagtgacctggtagcctgctacaaagatatt
ccactaaccacatctgctggtgtctgcaaggttgcaaccattaacaatggttccattagg
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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