KEGG   Populus trichocarpa (black cottonwood): 7498237
Entry
7498237           CDS       T01077                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
  KO
K10589  ubiquitin-protein ligase E3 C [EC:2.3.2.26]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    7498237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7498237
Enzymes [BR:pop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     7498237
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  HECT type E3
   7498237
SSDB
Motif
Pfam: HECT IQ
Other DBs
NCBI-GeneID: 7498237
NCBI-ProteinID: XP_002312309
UniProt: B9HIK0
Position
8:complement(6358729..6373554)
AA seq 1033 aa
MFFNGDSSTRKRVDLGGRSSKERDRKKLLEQTRLERNSRLWVKQQNAAAVKIQKWFRGRK
AVEAEHSRVRGKFHGTYGKCCQNVDRHCFGPDSEFFRQLLFFFNAKDSDDFTILVETCRL
LLQNVQDSGDIVSLFAGGDYSTKHALVEYRVKKLSFACIWAIYQNRKQLKDQLVMMPRDS
SITATLLLEAVALLIDPKLPWACKVVGYLLQRNVFALFREIVLTGKENMRSDSSIRNASP
LERILALVISHVGQKPCICPTIDLQWSFSSQMLTIPLLWRLFPNLKEVFATQGLSRHYIN
QMARCMRNNTYVLPNDLSVEYPGHACLLGNMLETAGAALSHADCSFEMAIDIAAVTTFLL
EALPPIKSSSPEIRPSSTLDEDDMALPDEMEIVLNKDLEHKIVHAMHSRFLLQLTSVLFG
EITMVSGSNHGLDDKEVAAIGAACAFLHVAFNTLPVERMMTVLAFRTELVQVLWNFMKQC
HENKKWPSLPDQLSYLPGNAPGWLLPLAVFCPVYKYMLMLVDNEEFYEQEKPLSLKDVRC
LIVILRQALWQLLWVNPKVNSNSVKLIKNTSVYSGNPIESIKQRVSLVASELLSQLQDWN
NRRQFAPPNDFHADGVDDSFISQAVIDGTKANDIMKQAPFLVPFTSRVKIFNSQLLAVRQ
RQGSHGVFTRNRYRIRRDHILEDAYNQMSALSEEDLRGLIRVSFINEFGVEEAGIDGGGI
FKDFMENITRAAFDVQYGLFKETSDHLLYPNPGSGMLHEQHLQFFHFLGTLLAKAMFEGI
LVDIPFATFFLSKLKKKYNYLNDLPSLDSELYRHLIFLKRYQGDISDLELYFVIVNNEYG
ELTEEELLPGGRNQRVTNDNVIPFTHLVSNYRLNYQIRLQSSHFMRGFQQLIKKEWIDMF
DEHELQLLISGSLDGLDIDDLRIHSNYGGGYHSEHYVIEMFWEVLKGFSMENQKKILKFV
TGCSRGPLLGFKYLEPLFCIQRAGGTASEEALDRLPTSATCMNLLKLPPYRSKEQLATKL
LYAINADAGFDLS
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgtttttcaacggcgattcatccacgaggaagcgagtcgatttaggaggccggagttcg
aaggagagagataggaagaagcttcttgaacaaactagattggaacgtaatagtcggttg
tgggtgaagcaacagaatgccgctgctgtcaaaattcaaaaatggttcagagggagaaag
gcagtggaggctgaacattctagggtgcgagggaagttccatggaacctatggcaagtgt
tgccaaaatgtagacaggcattgttttggtccggattcagagttcttccggcagctatta
tttttcttcaatgcaaaagatagtgatgatttcacaatcctcgtggagacttgccgattg
cttctgcaaaatgttcaagatagcggggatatcgtgagcctatttgctggtggggattat
tcaaccaagcatgctttggtggagtatagggtcaaaaaactatcatttgcctgtatttgg
gctatctatcaaaatagaaaacaattgaaggatcaattagtgatgatgcccagggattca
agcataacagcaactctcttgctggaagctgtagctttgctgatcgatcccaaacttcca
tgggcttgtaaggtcgttggttatctcttgcaaaggaatgtgtttgctctatttcgagag
attgttctaacaggaaaggagaatatgaggagtgacagttccatcagaaatgcatctcca
ttggagcgtattcttgcccttgtgatatctcatgttggtcagaagccatgtatttgcccc
accattgatctgcaatggagtttctcatctcagatgctgacaattcctttactatggcga
ctttttcctaatttaaaagaggtttttgcaactcaggggctgagccgacattacattaat
cagatggcacgttgcatgcggaataatacttatgtactgcccaatgatctttctgtggaa
tatcctggccacgcttgtcttctaggaaatatgttagaaaccgcaggagctgctttgtct
catgctgactgttcatttgagatggctatagatattgctgccgtgacaacattcttgttg
gaggcacttcctcctataaaatcatcaagtccagaaattagaccaagctccactctggat
gaggatgatatggctttgcctgatgaaatggaaattgtcttaaacaaggatttggaacac
aagatagtccatgctatgcattcacgctttctcttgcaattgacgagtgttttatttggg
gagattacaatggtcagtggttcaaaccatggactggacgataaagaggttgcagctatt
ggtgctgcttgtgcttttttgcatgttgctttcaacactttgccagttgagcgaatgatg
actgtactagcttttagaactgaacttgttcaagtgctttggaattttatgaagcagtgt
catgagaataaaaagtggccatccttgcctgatcagttatcatatctaccaggaaatgca
cctggctggctattacctctggctgttttttgtcctgtatataagtacatgcttatgtta
gttgacaatgaggagttctatgaacaggagaagcctttatcattgaaggatgtccggtgc
ctaattgttattttgagacaggccctatggcagctcctatgggtgaatcctaaagtgaac
agtaattcagttaaactcatcaagaacacctctgtttatagtgggaaccctattgaatct
attaaacagagagttagtcttgtagcctctgagctcctctctcagttgcaagattggaac
aatagacgacaatttgcaccacccaatgatttccatgctgatggtgttgatgactcattt
atttctcaggctgtaatagatggaaccaaagcaaatgacattatgaaacaggctcctttc
ttggtaccttttacaagcagagttaaaatattcaattcacaattattggcagttaggcaa
agacaagggtcccatggtgtttttacaagaaacagatacagaatacggagagatcatatt
ttggaagatgcttataatcagatgagtgcattgtccgaggaggatcttcgaggattgatt
cgtgtatcatttatcaatgagtttggagttgaggaagctggcattgatggtggtggcatt
tttaaagatttcatggaaaacattactcgagctgccttcgatgtgcagtatgggttgttt
aaggaaacatctgatcacctactctaccccaatcctggatcaggaatgctacacgaacaa
catcttcaattttttcattttcttggaactcttcttgcaaaggctatgtttgaaggtatt
cttgttgatataccttttgcaacattcttcctaagcaaattaaagaagaagtacaactat
ttgaatgacttgccttcattggattcagaattatatcgccaccttattttcctaaagcgt
tatcaaggtgatatttctgacttggagctctactttgtcatcgtaaataatgaatatggc
gagctaacagaagaggagctgcttcctggaggaagaaaccagcgtgtcactaatgacaat
gtcattccttttacccatcttgtatccaattatcgtctaaattatcagatacgtctacaa
agttctcatttcatgaggggctttcagcagcttataaagaaagaatggattgatatgttt
gacgagcatgaacttcagcttctgatatcaggttcgcttgatggcttggatattgatgac
ttgcgcattcatagcaattatggtggtggttatcatagtgagcattatgttattgagatg
ttctgggaagttctgaaaggtttttccatggaaaatcaaaagaaaattttgaagtttgtg
actggttgttcacggggacctttgcttggatttaaatatcttgagcccttattttgtata
caaagggctgggggcactgcctctgaggaagctcttgatcggctgccgacatcagctact
tgcatgaatcttctaaagcttccaccttatagaagcaaagagcagctagcaacgaaattg
ctatatgctataaatgctgatgcgggttttgatttgagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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