KEGG   Pseudomonas oryzihabitans: APT59_17740
Entry
APT59_17740       CDS       T04267                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
por  Pseudomonas oryzihabitans
Pathway
por03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:por00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    APT59_17740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:por03400]
    APT59_17740
Enzymes [BR:por01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     APT59_17740
DNA repair and recombination proteins [BR:por03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     APT59_17740
SSDB
Motif
Pfam: AAA_19 AAA_30 RecD_N AAA_11 Viral_helicase1 UvrD_C_2 Helicase_RecD SH3_13 AAA_22 UvrD-helicase PhoH AAA_16 AAA_17 AAA_25 AAA_28 AAA_5 SLFN-g3_helicase NTPase_1 T2SSE UvrD_C
Other DBs
NCBI-ProteinID: ALZ85953
UniProt: A0A0U4P4S4
Position
complement(3889271..3891352)
AA seq 693 aa
MSDFSTATQRLLRLASLVPEGELAPLRQRDDLFRLLELWVQRGWLRQVDRAFTTFLGELE
ADGEAAVLLAAALASHQLGHGHVCLDLAATLRNPDAALSLPPEGDETRSSLLPSQLLQGQ
SLEAWRQALLASVLVDGDGSAPERPLVLGGDRLYLRRYWNYEREVAASLRQRLATPEPLP
ADLTERLDQLFPPDPDAGGEPDWQKLACALAVRGAFSIVTGGPGTGKTTTVVRLLALLQA
PAVAAGRPLRIRLAAPTGKAAARLTESIGGQVSRLPVDDELRRHIPTGVTTVHRLLGSRP
NTRHFRHHRGHPLPLDVLVVDEASMIDLEMMASLLAALPPRARLVLLGDKDQLASVEAGA
VLGDLCRDAEAGRYSPATRAWLEGVSGQSLAHTALTVGDDQGDALAQQVVMLRRSRRFGA
GSGIGQLARRVNAQDGLGAQQVLIDGGYADLHRVLLKGPEDRALERLVLEGRGRARGYRH
YLEVLHETRPHLDSVLEDPAWTHWAGQVLAAFDDFQLLCAVRKGPWGVEGLNLRIASALL
AAGLLSSEHGWYEGRPVLVTRNDYSLGLMNGDIGITLCLPDATHPGRKVLRVAFPRGDGS
GGLRFVLPSRLSAVETVFAMTVHKSQGSEFAHTALLLPEQLSPVLTKELVYTGITRARDD
FTLIEARGGIFAEAVARRVRRVSGLDLDLRNTV
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgtctgatttcagcacggctacccaacgcctgttgcgtttggcctccctggtgccggaa
ggcgagctggcgccgctacgtcagcgcgacgacctcttccgcctgctggagctctgggtg
cagcgcggttggctgcgccaggtcgatcgtgccttcaccacctttcttggtgagctcgaa
gcggacggcgaggcggcggtgctcctggccgcggcgctggccagccatcagctcggccat
gggcatgtctgcctggatctggctgccaccctgcgcaatcccgatgccgccctgtcgctg
ccgcccgagggggacgagacacgcagctcgctgctgccctcgcaactgctccagggtcag
agcctggaggcctggcgccaggcgctgctggccagcgtgctggtcgatggcgacggcagc
gcgccggagcggccactggtactggggggcgatcgcctctatctgcgccgctactggaat
tacgagcgcgaggtggcggccagcctgcgccagcgcctggcgaccccggagccgctgccc
gcggatctcaccgagcgcctcgaccagctgtttccgccggatcccgatgcgggtggtgag
cccgactggcagaagctggcctgcgccctggcggtacgtggcgccttcagcatcgtgacc
ggcggccccggtaccggcaagaccaccaccgtggtgcggttgctggcgctgctccaggcg
ccggcggtggcggccggtcgccctctgcgtatccgcctggccgcgcccactggcaaggcc
gccgcgcgcctcaccgaatccatcggcggccaggtcagtcgtctgccggtggacgacgag
ctgcgccggcacatccccacgggggtgaccacggtgcaccggttgctgggcagtcgaccc
aatacccggcacttccgccaccaccgcgggcacccgctgccgctggacgtcctggtggtg
gacgaggcctcgatgatcgatctggaaatgatggccagcctgctggcggccttaccgccc
cgggcgcgcctggtgctgctcggcgacaaggaccagttggcttcggtggaggcgggggcg
gtgctgggcgatctctgtcgcgacgccgaggcggggcgctacagccccgccacccgtgcc
tggctggaaggggtgagcggtcagtcgctcgcccatacggcgctgacggtcggtgacgac
caaggtgacgccctggcccaacaggtggtgatgctcaggcgctcgcgacgcttcggcgcg
ggcagcggcatcggccaactggcacggcgggtcaatgcccaggacggcctgggggcccag
caggtactaatcgacggtggctacgccgacctgcaccgggtgctgctcaagggaccggag
gatcgcgccctggagcgtctggtgctggaaggtcgtgggcgcgctcgtggctatcgtcat
tatctcgaggtcctgcatgagacgcggccccacctcgacagcgtgctggaggatccggcc
tggacgcactgggccggccaggtattggccgccttcgatgatttccaattgctctgcgcc
gtgcgcaagggcccctggggcgtcgaaggtctcaacctgcgcatcgccagtgccttgctg
gctgccggcctgctctcgagtgagcacggctggtacgaaggccgcccggtgctggtgaca
cgcaacgactacagcctggggttgatgaacggcgacatcggcatcaccctctgtctgccc
gatgccacccatcccgggcgcaaggtgctgagggtcgcctttccccggggcgatggcagc
ggcggcctgagatttgtcttgcccagccggctatcggcagtggagacggtgttcgctatg
accgtccacaagtcccagggctcggaattcgcccataccgcgctgctgctgcctgagcag
ctcagcccggtgctgaccaaggagctggtctataccggcatcacccgggcgcgcgatgat
ttcaccctaatcgaggcccgcggcggcatcttcgccgaggcggtggcacgccgggtccgc
cgcgtcagtggcctggacctggatttgcgaaatactgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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