KEGG   Pseudomonas oryzihabitans: APT59_20805
Entry
APT59_20805       CDS       T04267                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
por  Pseudomonas oryzihabitans
Pathway
por00300  Lysine biosynthesis
por00470  D-Amino acid metabolism
por01100  Metabolic pathways
por01110  Biosynthesis of secondary metabolites
por01120  Microbial metabolism in diverse environments
por01230  Biosynthesis of amino acids
Module
por_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:por00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    APT59_20805
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    APT59_20805
Enzymes [BR:por01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     APT59_20805
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ALZ86528
UniProt: A0A0U4VTD2
Position
4560880..4562127
AA seq 415 aa
MEVFAVRAGELHAEGVALSAVAQQFGTPAYVYSRAHIESQYRAYTDALAGLPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPHRVVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQQVAAELGVVAPISLRVNPDVDAGTHPYISTGLKENKFGIDIADAEA
VYARAAELPNLEILGVDCHIGSQLTTLPPFLDALDRLLALIDRLAERGILIRHLDLGGGL
GVRYRDEQPPLAGDYIQAIRERIVGRNLTLVFEPGRFIVANAGVLLTRVEYLKHTPHKDF
AIVDAAMNDLIRPALYQAWMAVEPVVARQGEARRYDLVGPICETGDFLAKDRELVLAEGD
LLTIRSAGAYGFTMSSNYNTRGRAAEVMVDGDQAHLVRRRETVDELFAGESRLPA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggaagtcttcgctgtccgtgcaggtgaactgcatgcggaaggggtagccctgagcgcc
gtggcgcagcagttcggcacccccgcctatgtctactcgcgagcgcatatcgagagccag
taccgcgcctataccgatgcgctggccggtctgccgcacctggtctgctttgccgtcaag
gccaactccaacctcggcgtgctcaacgtcctggcccgcctcggcgccggcttcgacatc
gtctcccggggcgagctggagcgggtgctggccgccggtggcgatccgcaccgggtggtg
ttctccggggtcggcaagacccgcgacgacatgcgccgggcgctggaagtgggcgtgcac
tgcttcaacgtcgaatccaccgacgaactggagcggctgcaacaggtggccgccgagctg
ggcgtggtcgcgccgatctcgctgcgggtcaatcccgacgtcgacgccggcacccacccc
tacatttccaccggtctcaaggaaaacaagttcggcatcgacatcgctgacgccgaggca
gtctatgcccgcgccgccgagctgccgaacctggaaatcctcggcgtggactgccacatc
ggctcccagctcactacgctgccgcccttcctcgatgccctcgaccgcctcctggcgctg
atcgaccgcctcgccgagcgcggcatcctgattcgccacctggacctgggtggcggcctg
ggcgtgcgctatcgcgacgagcaaccgccactggccggcgactacatccaggccatccgc
gagcgcatcgtcgggcgcaacctgaccctggtgttcgaaccgggccgcttcatcgtggcc
aacgcgggcgtcctgctgacccgcgtggaatacctcaagcacaccccccacaaggatttc
gccatcgtcgatgcggcgatgaacgacctcatccgtccggccctgtaccaggcctggatg
gcggtggaaccggtggttgcacgccagggcgaagcccgccgctacgacctggtcggcccc
atctgcgagacgggcgacttcctcgccaaggatcgcgagctggtgctggccgagggcgat
ctgctgaccatccgctccgccggagcctatggcttcaccatgagttccaactacaacacc
cgcggccgtgcggccgaggtgatggtggatggcgaccaggcccacctggtgcgccggcgc
gagacggtggacgaactcttcgcaggcgaaagccggctgccggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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