KEGG   Porphyrobacter sp. LM 6: BG023_11636
Entry
BG023_11636       CDS       T04468                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
porl  Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:porl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:porl03032]
    BG023_11636
   03400 DNA repair and recombination proteins [BR:porl03400]
    BG023_11636
Enzymes [BR:porl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BG023_11636
DNA replication proteins [BR:porl03032]
 Prokaryotic type
  DNA Topoisomerases
   BG023_11636
DNA repair and recombination proteins [BR:porl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BG023_11636
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GH18_BT1044-like HATPase_c_3 GyrB_insert
Other DBs
NCBI-ProteinID: AOL93589
UniProt: A0A1D7NIS3
Position
complement(633284..635845)
AA seq 853 aa
MDDNTNQPPAKLPNANEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNA
IDEALAGHCDLVLIELNPDGSVSVEDNGRGIPTGMHAEEGVSAAEVIMTQLHAGGKFENT
SDDNAYKVSGGLHGVGVSVVNALSEWLELTIWRDGQEHWMRFEHGDAVGPLKVVADAPKS
DRNADPNGFKKGTRVTFKASHDTFKNVTEFDFEKLEHRYRELAFLNSGVRIKLRDKRHEE
LIEHDLYYEGGIAAFVKYLDRNKQPLVAEPIAVSAEKDGIGIDVALEWNDSYYENVLAFT
NNIPQRDGGTHLAAFRAALTRTLNNYAERSGMLKKEKVSLSGEDMREGLTAIVSVKLPDP
KFSSQTKDKLVSSEVRSPLESLMSEKMTEWLEENPNDARAIIQKVIDAAAAREAARRARE
MSRKGAMSVASLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRDRKTQAILPLKGKIL
NVERARFDRIISSKEVGTLIQAMGTGIRDEFNLEKLRYHKIVIMTDADVDGAHIRTLLLT
FFHRQMPEIIKAGHLFIAQPPLFKVSKGRSEVYLKDQAALDRYLVEAGLQGRMLETSGGP
RAGEDLRTLVDGALRLKNLLAFVPRRYDSGIVEQMALVGALEPGLAGEALTAALARAAGR
LGAGDREARWSASQRPDGTVIFERLWRGVTDVHEIDARFLSSTEAHKLHGLAAAQAEAYA
TPVSLVRAGDVAEEAEPETPVSDDPLAGEAEEAVAAPAATFDGAISRPTQLLDAIFVAGR
KGLSISRYKGLGEMNAEQLWETTLDPEARILLQVKVEDADVTDEIFTRLMGDIVEPRREF
IQDNALNVANLDV
NT seq 2562 nt   +upstreamnt  +downstreamnt
atggacgacaacaccaatcagccccccgcaaaactgcccaacgccaacgaatacggcgcg
gattcgatcaaggttctcaagggcctcgacgcggtccgcaagcggccggggatgtatatc
ggcgacaccgacgacgggtcgggcctgcaccacatggtattcgaggtctcggacaacgcc
atcgacgaggcgctggcggggcattgcgacctcgtgctgatcgaattgaaccccgatggc
tcggtctcggtagaggataacgggcgcgggattccgacgggaatgcacgccgaagagggc
gtatcggcggccgaagtcatcatgacccagctgcacgccgggggtaagttcgagaacacc
tctgacgataatgcctacaaggtttcgggcggcctccacggcgtgggcgtgtcggtggtg
aatgcgctcagcgaatggctcgaactcaccatctggcgcgacgggcaggagcactggatg
cggttcgagcatggcgatgccgtcggcccgctcaaggtcgtcgccgatgcgcccaagagc
gaccgcaacgccgatcccaatggcttcaagaagggcacgcgcgtcaccttcaaggcgagc
cacgataccttcaagaacgtcaccgagttcgatttcgaaaagctcgaacaccgctaccgc
gaactcgcgttcctcaactcgggcgtgcgcatcaagctgcgcgacaagcgccacgaagag
ctgatcgagcacgatctctactacgagggcgggattgcggccttcgtcaaatatctcgat
cgcaacaagcagccgctggtggccgaaccgatcgcggtctcggccgagaaggacggcatc
ggcatcgacgtcgcgctcgaatggaacgattcctattacgaaaacgtcctcgccttcacc
aacaatatcccccagcgcgacggcggcacgcaccttgcggccttccgcgccgcgctgacc
cgcacgctcaacaactatgccgagcgttcggggatgctgaagaaggaaaaggtcagcctc
tcgggcgaggatatgcgcgaaggcctcactgccatcgtcagcgtcaagctgcccgacccg
aagttctccagccagaccaaggacaagctggtctcctccgaagtgcgctcgccgctcgaa
tcgctgatgagcgagaagatgaccgagtggctggaggaaaacccgaacgatgcccgcgcg
attatccagaaggtgatcgacgccgccgccgcccgcgaagccgcccgccgcgcgcgcgaa
atgagccgcaagggcgcgatgagtgtcgcctcgctgccgggcaagctcgccgattgtcag
gagcgtgatcccgccaagtccgaactgttcctggtcgaaggggactccgcaggcggctcg
gccaagcaggggcgcgaccgcaagacccaggcgatcctgccgctcaagggcaagatcctc
aacgtcgagcgcgcgcggttcgaccggatcatttcctcgaaggaagtcggcaccctcatc
caggcgatgggcaccggcatccgcgacgaattcaacctcgaaaagctgcgctaccacaag
atcgtcatcatgaccgacgcggacgtggacggcgcgcatatccgcacgctgctcttgacc
ttcttccaccgccagatgcccgaaatcatcaaggccgggcacctgttcatcgcccagccg
ccgctgttcaaggtctccaaggggcgcagcgaggtctacctcaaggatcaggccgcgctt
gatcgctatctggtcgaggcggggctgcagggccggatgctggaaacctccgggggcccg
cgtgcaggcgaggatctgcgcacgctggtcgatggcgcgcttcggctcaagaacctgctg
gccttcgtgccgcgccgctatgattcgggcattgtcgagcaaatggcgctggtcggcgcg
ctcgagccggggctggcgggcgaggcgctcaccgccgcgctggcgcgcgctgccggacgg
ctcggtgcaggcgaccgcgaagcccgctggagcgcctctcagcgccccgacggcacggta
attttcgagcgcctgtggcgcggcgtgaccgatgttcacgagatcgatgcgcgcttcctt
tccagcaccgaagcccacaagctccacggcctcgccgctgcgcaggccgaggcctatgcc
acgccggtcagcctggtgcgcgcgggcgatgtggctgaagaggccgaacccgaaaccccc
gtctccgacgatccgctggcaggcgaagccgaagaggctgttgccgcaccggctgccacc
ttcgatggcgcgatcagccggccgactcagctgctcgacgcgatcttcgtcgccgggcgc
aagggcctgtcgatcagccgctacaagggccttggcgaaatgaacgccgagcagctctgg
gaaaccacgctcgaccccgaggcgcgcatcctgctgcaggtcaaggtcgaggacgccgac
gttaccgacgagatcttcacccgcctgatgggcgatatcgtcgaaccgcggcgcgagttc
atccaggataacgcgctcaacgtagccaatctcgacgtctag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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