KEGG   Polaromonas sp. SP1: DT070_12250
Entry
DT070_12250       CDS       T05689                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
pos  Polaromonas sp. SP1
Pathway
pos00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pos00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DT070_12250 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pos01007]
    DT070_12250 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pos03016]
    DT070_12250 (lysS)
Enzymes [BR:pos01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     DT070_12250 (lysS)
Amino acid related enzymes [BR:pos01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   DT070_12250 (lysS)
Transfer RNA biogenesis [BR:pos03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    DT070_12250 (lysS)
 Prokaryotic type
   Other AARSs
    DT070_12250 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AYQ28727
Position
complement(2596962..2598521)
AA seq 519 aa
MSNQPTPPTAASNTAPAPQDDNKLIVERREKLKVLRQNQADGKGVAFPNDFKPADHAGKL
HAAHGDKDGEALAAEAIPAKIAGRMMLKRVMGKASFATLQDSTGRIQIFLTRDEIGEELY
AAFKHWDLGDIIAAEGKVFKTKTGELSIHATSVRLLTKSLRPLPGDFYGMADQEQKYRQR
YVDLITDEQARKRFTARSKAVSSIREFMVAHDFLEVETPMLHPIPGGANAKPFKTHHNAL
DQEMFLRIAPELYLKRLIVGGFDRVFEINRSYRNEGISVRHNPEFTMMEFYAAYWDYNDL
MDFTEALIRDAAQKAVGTLQLSYGGKEEKVDLAKPFARLTIREAILKHTEAGEHVDDAAW
LTNALRKLGMNEEKDRLSTRSLASLQVLYFEELVEEKLWQPTFIMEHPTEISPLARANDT
RPEVTERFELYITGREFGNGFSELNDAEEQAARFNAQVAAKDSGDDEAMFYDHDFVRALE
YGMPPTGGCGVGIDRLMMLLTDSASIRDVILFPALRREV
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtccaaccagccgactccgcccactgccgcaagcaacaccgcccccgccccgcaggac
gacaacaagctgatcgtcgagcgccgcgaaaagctcaaggtcttgcgccagaaccaggca
gacggcaaaggcgtggcctttcccaacgacttcaagcccgccgaccacgccggcaagctg
cacgccgcccacggcgacaaggatggcgaagcgctggccgcggaagcgattcccgccaag
attgccggccgcatgatgctcaagcgcgtgatgggcaaggcgagttttgcgaccctgcaa
gacagcaccgggcgtatccagattttcctcacgcgcgacgaaatcggcgaagagctctac
gccgccttcaagcactgggatctgggcgacatcatcgcggccgagggcaaggtcttcaag
accaagaccggcgagctgtccatccacgcgaccagcgtgcgcctgttgacgaagagcctg
cgccccctgcccggcgatttttacggcatggccgaccaggaacaaaaataccgccagcgt
tatgtcgacctgatcaccgacgagcaggcccgcaagcgcttcaccgcgcgcagcaaggcc
gtcagctcgatccgcgaattcatggtcgcccacgacttcctcgaagtcgaaacgccgatg
ctgcaccccatcccgggcggcgccaatgccaagcccttcaagacgcaccacaacgcgctg
gaccaggagatgtttttgcgcatcgcgccggagctctacctcaagcgcctgatcgttggc
ggttttgaccgcgtcttcgagatcaaccgcagctaccgcaacgagggcatctcggtgcgg
cacaaccccgaattcaccatgatggagttctatgcggcgtactgggactacaacgacctg
atggacttcaccgaggcattgatccgcgacgccgcgcaaaaggctgtgggcacgctgcag
ttgagctacggcggcaaggaagaaaaggtcgacctcgccaaaccctttgcccgcctgacg
atccgcgaagccatcctcaagcacaccgaagccggcgagcatgtcgacgacgccgcctgg
ctgacgaatgcgctgcgcaagctgggcatgaacgaggaaaaagaccgcctctcaacccgc
tcgctggccagcctgcaggtgctgtattttgaagagctggtcgaggaaaagctctggcag
ccgaccttcatcatggagcacccgacggagatttcgccgctggcgcgtgccaacgacaca
cgccccgaagtgaccgagcgctttgagctgtacatcaccggccgcgaattcggcaacggc
ttcagcgagctgaacgacgccgaagagcaggccgcccgcttcaacgcccaggtggccgcc
aaagacagcggcgacgacgaagccatgttctatgaccacgactttgtgcgcgccctcgaa
tacggcatgccgcccaccggcggctgcggcgtggggattgaccgcctgatgatgctgttg
acggacagcgccagcattcgcgacgtgattctctttcctgcattgcgacgtgaggtttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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