KEGG   Polaromonas sp. SP1: DT070_16390
Entry
DT070_16390       CDS       T05689                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pos  Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:pos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pos03016]
    DT070_16390
Enzymes [BR:pos01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DT070_16390
Transfer RNA biogenesis [BR:pos03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DT070_16390
 Prokaryotic type
    DT070_16390
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: AYQ29459
Position
3440879..3441925
AA seq 348 aa
MTQTSSHRQKIQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRADKAGHTGTLDPLATGVL
PLCFGAATKFSQIQLDADKTYEAVLLLGQKTTTADAEGDVIETRPVPEITPALLEALTAR
FTGPLAQIPPMYSALKKDGKALYEYARKGEDVEREARHITIFKLNMALAQDSRAPAAIKI
IVTCSKGTYIRTLGEDIGEAIGCGAHLGSLRRLETGGYGTQQCVTLPALEAMTEPEREAC
LLPAQSLVSAYPSVTLDADNAGRFLSGLRRRGEPGQWGADAPLVQVYGTAPPAFLGSAHV
TADELIPQRLLSPIEIQDILQAAKTRAELFSPDPAAAPTGAEAPSFQH
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgacgcaaacctcttcacatcgccagaaaatccagcgacgtcccgtgcacggcgtgctg
ctgctcgacaagccgctgggcctgtcgagcaatcaggccttgcagaaggccaaatggctg
ctgcgcgccgacaaggccggccacaccggcacgctggacccgctggccaccggcgtgctg
ccgctgtgcttcggcgcggcgaccaaattcagccagatccagctcgacgccgacaagacc
tacgaggccgtgttgctgctgggccagaaaaccacgacagccgacgccgaaggcgacgtg
atcgaaacccggcctgtgcccgagatcacgcccgccttgctcgaggccctgacggcgcgt
ttcaccggcccgctggcgcagatcccgccgatgtactcggcgctcaagaaagacggcaag
gcgctgtatgaatacgcccgcaagggcgaagacgtggagcgggaagcccgccatatcacg
attttcaagctgaatatggctctggcccaagacagccgtgcacctgctgctatcaaaata
atagtgacctgcagcaaaggcacctacatccgaacgctgggcgaagacatcggcgaggcc
atcggttgcggcgcccacctcggctcgctcaggcggctggagaccggcggctacgggacg
cagcagtgcgtgaccttgccggcgctggaggccatgaccgagcccgaacgcgaagcctgc
ctgctgccggcgcagtcgctggtgtcggcgtacccgtctgtcacattggacgccgacaat
gcagggcggtttttaagcggcctgcgccgccggggcgagcccggccagtggggcgccgat
gcgccgctggtgcaggtttacggcactgcacccccggccttcctgggctcggcccatgtg
acggccgacgaattgattccgcagcgtctgctgagcccgattgaaatacaggacatcctg
caagccgccaaaacgcgtgccgaacttttttcacccgatcccgctgccgcgcccaccggc
gccgaagctccttctttccaacattaa

DBGET integrated database retrieval system