KEGG   Polaromonas sp. SP1: DT070_20275
Entry
DT070_20275       CDS       T05689                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
pos  Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:pos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pos03009]
    DT070_20275
   03016 Transfer RNA biogenesis [BR:pos03016]
    DT070_20275
Enzymes [BR:pos01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     DT070_20275
    5.4.99.29  23S rRNA pseudouridine746 synthase
     DT070_20275
Ribosome biogenesis [BR:pos03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DT070_20275
Transfer RNA biogenesis [BR:pos03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    DT070_20275
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AYQ30142
Position
4314547..4315461
AA seq 304 aa
MKGPAHGLPARSGVSPSCVGLPAGDWGTITDFLVQRFPAIPRETWLQRMADGLVADEFGE
AVTPERPYRGHMRVYYYRALDDEPRVPFEASVLWQDEHLVVADKPHFLPVTPSGHYLQET
LLVRLKNSLGLEGLAPIHRIDRETAGLVLFSVKPGERDAYQALFRRHEVRKDYEAIAPWR
ADIGFPLTRKSRIVQGEPFFRQCEAEGDPNSETRIDLLQTAPRTRLARYALSPVTGKKHQ
LRVHMNAVGIPILHDRIYPPVHPTPDDDYSRPLQLLAKTVRFTDPFTGEARAFHTRLSLF
LDLS
NT seq 915 nt   +upstreamnt  +downstreamnt
gtgaaagggcctgcccacggcttgccggcccgcagcggggtcagccctagctgcgtcggc
ctgccggccggtgactggggcaccatcacggacttcctggtccagcgctttcctgcgatc
ccgcgtgaaacctggcttcaacgcatggcggacgggctggtggccgatgaattcggcgaa
gccgtcacccccgaacgcccctaccggggccacatgcgcgtttactactaccgcgccctg
gacgacgagccccgtgtgcccttcgaggccagcgtgctgtggcaggacgagcacctcgtt
gtggccgacaaaccgcattttttgcccgtcacgccctcgggccactaccttcaggagacg
ctgctggtgcggcttaaaaacagcctgggcctggaaggcctggcgccgattcaccgcata
gaccgcgagaccgccggcctggtgctgttttccgtcaaacccggtgagcgcgacgcctac
caggcccttttcaggcgccacgaagtacgcaaagactacgaagccatcgcgccctggcgt
gcagacatcggctttccgctgacccgcaaaagccggatcgtccagggcgaacccttcttc
cggcaatgcgaggccgagggggacccgaacagcgaaacccgtatcgaccttctgcagaca
gcaccccgcacccgcctggcgcgttacgccttgagcccggtgaccgggaaaaagcaccag
ttgagggtgcacatgaatgccgtgggcatccccatcctgcatgaccggatttacccgccg
gtgcaccctaccccggatgacgactacagccggccgctgcaactgctggccaaaaccgtg
cgcttcacggaccccttcacgggtgaagcccgcgcatttcacacgcgcctcagccttttc
ctggacctgagttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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