KEGG   Porphyrobacter sp. YT40: E2E27_01005
Entry
E2E27_01005       CDS       T06153                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pot  Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:pot00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pot02044]
    E2E27_01005 (tssF)
Secretion system [BR:pot02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E2E27_01005 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QDH36006
Position
complement(206427..208283)
AA seq 618 aa
MDPRLLEYYEAELEYLRVQSLEFAERHEAAATNLGLTGGERDPYVERLLEGVAFLSSRVQ
LKLDDQFPEFTQHLLQAVQPHYLAPTPSICITGFEPVTGDPGLARGLQVPRGTQLSAEPQ
GSSRTPVIFQTGQDVTLWPLRITEAEYLGSRAGAARYADLAGVRAQAALTLRIEAQDGID
LSTIAADDLPIYLDGGEGVANELYRQLIGEAVAVVARPLDVAGSTHALLDTPAQHGFGED
CALLPDDGRTLSAYRMLTEYFACPERFRFARLRGLRRALALSSKAVEITILFSRSSDALV
QSVSTRNFRLFATPAINLFEKQLSRIAFSEREHEFKVVADRDGPLDFEVFRLLKVEAYDR
QNQNPREVAPLYSYGSLLYDYRSAIFYTTRLRLRQMSRKERRLRRREDYVGTDMFITLTS
PGDPARLDSVHDLALRALVTNRELPVDLKVSGDFHLTAASIAARGIKILRPPTRPLPPLG
IGDAAWRVIGHLTPNYATLVSEGGGNGEMLRNHLALYGRPDDPVMRSQIDGIIGVKGEHV
TRRVPGIGRMALARGLRISIELDDAAFDQARLFLFSAVVERFLSGFVTVNSFTETRFHTK
AQGEVAAWPPRIGTREPI
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggatccccggctgctcgaatattacgaggccgagctcgaatatctgcgggtccagtcg
ctcgaattcgccgaacggcacgaggcggcggcgaccaatctcggcctgacggggggggag
cgcgatccctatgtcgagcggctgctcgaaggcgtggcgttcctgtcgagccgggtgcag
ctgaagctcgacgaccagttccccgaattcacccagcacctgttgcaggcggtgcagccg
cattacctcgcgcccacgccttcgatctgcatcaccgggttcgagccggtgacgggcgat
ccgggccttgcgcgcgggctgcaggtgccgcgtggcacgcagctttcggccgagccgcag
ggcagctcgcgcactccggtgatcttccagaccgggcaggatgttacgctgtggccgctc
aggatcaccgaagcggaatatctcggcagccgggccggggcggcgcgctatgccgatctg
gcgggagtgcgcgcgcaggcggcgcttaccttgcggatcgaggcgcaggacggcatcgac
ctctcgaccatcgctgccgacgatctgccgatctatctcgacggcggcgagggtgtggcg
aacgagctctaccgccagctgatcggcgaggccgtggcggtggtggcgcggccgctcgat
gtggcgggttcgacccatgcgctgctcgataccccggcgcagcacggcttcggcgaggac
tgcgcgctgctgccggacgacgggcgcacgctgtcggcctaccggatgttgaccgaatat
ttcgcctgtcccgagcggttccgcttcgcacggctgcgcggtctgcgccgggcgctggcg
ctgtcgagcaaggcggtggagatcaccattctgttctcgcgatcgtcggatgcgctggtg
caatcggtcagcacccgcaatttccgcctgttcgcgacgcctgcgatcaacctgttcgaa
aagcagctcagtcgcatcgccttttccgagcgggagcacgagttcaaggtggtggccgac
cgcgacgggccgctcgatttcgaggtgttccggctgctcaaggtcgaggcctatgatcgc
cagaaccagaacccgcgcgaggtggcaccgctctattcctatggctcgctgctgtatgat
taccgctcggcgatcttctacaccacccggctgcggctgcggcagatgtcgcgcaaggag
cggcggctgcggcggcgcgaggactatgtcgggaccgacatgttcatcacgctcacaagc
cccggcgatccggcgcggctcgacagcgtgcacgatctcgccctgcgcgcgctggtgacc
aatcgcgagctgccggtcgatctcaaggtgtcgggcgattttcacctgacggcggcgagc
atcgcggcgcgagggatcaagatcctgcgcccgccaacgcgtccgctgccgccgctggga
atcggcgatgccgcatggcgggtgatcgggcacctcacccccaattacgccacgctggtg
agcgaaggcggcggcaatggcgagatgctgcgcaatcatctcgcgctctatggccggccg
gacgatccggtgatgcgctcgcagatcgacgggattatcggggtgaagggcgagcacgtc
acccgccgcgttccggggatcgggcggatggcgctggcgcgggggctaaggatcagcatc
gagctggacgatgccgccttcgatcaggcgcgactattcctgttcagcgcggtggtggag
cgctttttgagcggcttcgtcaccgtcaattccttcaccgaaacgcgtttccacaccaag
gcacagggggaggttgccgcatggccgccgaggatcgggacgcgcgagcctatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (6)   

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