KEGG   Porphyrobacter sp. YT40: E2E27_10530
Entry
E2E27_10530       CDS       T06153                                 
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
pot  Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:pot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pot03009]
    E2E27_10530
Enzymes [BR:pot01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     E2E27_10530
Ribosome biogenesis [BR:pot03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    E2E27_10530
SSDB
Motif
Pfam: Methyltr_RsmB-F MTS FtsJ Methyltransf_25 Ubie_methyltran Methyltransf_15
Other DBs
NCBI-ProteinID: QDH34718
Position
2248605..2249783
AA seq 392 aa
MTPAARIQAAIELLDTVIASARAKGAPADRIIADYFRARRYAGSKDRRAVRDLVYRAIRL
CGPVPASGRAAMLAVAAQDEAVRAQFDASPHGPAPIGEGEEPASTGLAPKWLAAALRASD
LGGREIAALLGRAPLDIRVNALKADRGTIALPETGEALPSAQGLRFASGTPVEQWEAYAE
GLIEVQDCGSQLIVEALPVAPGDTIIDLCAGGGGKTLALAARLGNAASLVAADTDKRRLG
NLAPRAARAGAAVDHTVLLDPGREMQALAPFAGKADHVLVDAPCSGSGTWRRSPEGRWRL
DKGELGRLNQLQDHVLALAARLTCPGGSIAFVTCSVLDAEGPDRITAFLARHPGWRSEPL
TLPLGRPRGAGIRLDPLHDGTDGFFIACLRSP
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgacccccgccgctagaatacaggcggcgatcgagctgctcgataccgtcatcgcatcg
gcccgcgccaagggtgcgcctgccgaccggatcatcgccgattatttccgcgcccgccgc
tatgccggatcgaaagaccggcgggcggtgcgcgatctcgtttaccgcgcgatccggttg
tgcggcccggtgcccgccagcggccgcgcggcgatgctggcggtggcggcgcaggacgaa
gcggtgagagcgcagttcgacgcctccccccacggtcccgcaccgatcggcgagggtgag
gagcccgccagcaccggccttgcccccaagtggctcgccgcggcgctgcgcgcctcggac
ctcggcgggcgcgagattgccgccctgctgggccgcgcgccgctcgatatccgggtcaat
gccctgaaggccgaccgcggtacaatcgcgctgcccgaaacgggcgaggctctgccctcg
gcgcaaggcttgcgctttgcctcgggcacgccggtcgaacaatgggaggcctatgccgaa
gggctgatcgaggtgcaggattgcggaagccaactgatcgtcgaggcgctgccggttgcg
cccggcgataccattatcgatctgtgcgccgggggagggggcaagaccctcgcactcgcc
gcaaggctgggcaatgccgcgagcctcgttgccgccgacaccgacaagcgccgcctcggc
aacctcgcaccgcgggccgcgcgcgccggtgcggcggtggatcacaccgtgctgctcgat
ccgggccgcgagatgcaggcgctggcgccctttgcggggaaggccgatcacgtgctggtc
gatgcgccctgttcgggaagcgggacatggcggcgcagcccggaggggcgctggcggctc
gacaagggcgagcttggtcggctgaatcagttgcaggaccatgtgctcgctctcgccgcg
cggctgacgtgccccggcggcagcatcgccttcgtcacctgctcggtgctcgatgccgaa
gggccggaccgcatcaccgccttcctcgcccgccatcccggctggcgcagcgagccgctg
acgctcccgctgggccgcccgcgcggcgcgggaatccggctcgatccgctccacgacggc
acggatggttttttcatcgcctgcttgcgttcaccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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