KEGG   Porphyrobacter sp. YT40: E2E27_10650
Entry
E2E27_10650       CDS       T06153                                 
Name
(GenBank) hypothetical protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pot  Porphyrobacter sp. YT40
Pathway
pot03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E2E27_10650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pot03400]
    E2E27_10650
Enzymes [BR:pot01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     E2E27_10650
DNA repair and recombination proteins [BR:pot03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     E2E27_10650
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: QDH34740
Position
complement(2273543..2274055)
AA seq 170 aa
MEFRDWWLASPALETARAFPRIAPRGACEPALMVLVPQPEESDRDTLLSGPQGRLLANIL
VAMGLAEDAVYIASALPSHTPMADLAMIAASGMDAVTAHHIALVKPARLVAFGTGLAPML
FGAGEQPLREINHAGGKIPVMSSETLDSLMDMPRLKARFWRRWMEWSASH
NT seq 513 nt   +upstreamnt  +downstreamnt
atggaattccgcgactggtggcttgccagccccgcgcttgaaacggcccgcgcctttccc
cggatcgcgccgcgcggcgcctgcgaaccggcgctgatggtactggtaccccagcccgaa
gagagcgaccgcgacactctgctgagcgggccacaggggcggctgctcgccaatattctc
gtcgcgatggggcttgccgaggacgcggtgtatatcgcatccgcgctccccagccatacg
ccgatggccgatctggcgatgatcgcggcaagcgggatggatgcggtcaccgcgcatcac
atcgcgctggtgaagcccgcgcggctggtcgccttcggcaccggccttgcgccgatgctg
ttcggagcgggcgaacagcctttacgtgaaatcaaccatgccgggggcaagatcccggtc
atgtcgagcgaaacgctcgattccctgatggatatgccccggctcaaggcccggttctgg
cggagatggatggaatggtcggcctcacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system