KEGG   Paralichthys olivaceus (Japanese flounder): 109629274
Entry
109629274         CDS       T06037                                 
Symbol
tfeb
Name
(RefSeq) transcription factor EB isoform X1
  KO
K15590  transcription factor EB
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov04020  Calcium signaling pathway
pov04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:pov00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    109629274 (tfeb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    109629274 (tfeb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pov03000]
    109629274 (tfeb)
Transcription factors [BR:pov03000]
 Eukaryotic type
  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Ubiquitous bHLH-ZIP factors
    109629274 (tfeb)
SSDB
Motif
Pfam: MITF_TFEB_C_3_N DUF3371 HLH
Other DBs
NCBI-GeneID: 109629274
NCBI-ProteinID: XP_019942470
Position
Unknown
AA seq 545 aa
MLCLRLPLGLDCGALTPARPPLPPRPPAMASRIGLRMQLMRDQLQQEEQREREQRQQNAV
LQPYMRHRMAGPPAPTPAISTPQHYQSMQVPVEVLKVQTHLENPTDYHIRQSQRQQVKEY
LSTTHATKQTVHAAAGLIPPSSPTKMGPTGGSASAPPPLHSPHMRTEQLLSGNSAPNSPM
AMLNISSSHENEMDEVIDDIISMQSSYDDIQAYIDPVQMPNTLPLSSSHLDVYTGPGMKG
PAIAMTSNSCPANLTVKRELSEARAMAKERQKKDNHNLIERRRRFNINDRIKELGTMIPK
TNDLVHSDVRWNKGTILRASVEYIKRMQKDMHRSREVENNFKRMEMTNKQLLLRIQELEM
QAHLHGLPNTSPSGLNLSDLMSPYIKQELSPEDKLSHPQIQAHHQPLHLPRNQAQPQPHQ
HHFLPQNHLQLQQGQQQPRQLQQLPQHLQQQAPIQFPAVGSSQPFDYAQSLDLCDSIPGF
SDGISGLGDLGGLDVEGRRGELGFLMMDEPLSPMGGDPLLSALSPEASVDSSRRSSFSIE
DGDIL
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgctgtgtcttcgtctacctctcgggctggactgcggtgcactgacgccggctcgccct
cccctgccccctcgccccccagcaatggcctcacgcatcgggctgcgtatgcagctgatg
cgagaccagctgcagcaagaggagcagcgggaacgggagcagcggcagcagaatgcagtc
ttgcagccttacatgcgtcatcgcatggccgggccgcctgcacccaccccggccatcagc
accccacagcattaccaaagcatgcaggtccctgtggaggttctcaaggtacagactcac
ctcgagaaccccacagactaccacatccgacagtcacagaggcaacaggtgaaagaatac
ctttcgacaacccatgccaccaaacagacagtccatgcagccgcaggcctgattccaccc
tcttctcccacaaaaatgggacccacaggggggtctgcatctgcccccccgccccttcat
tctccacatatgcgcaccgagcagctcctgtctggcaacagtgcacccaacagccccatg
gccatgctcaacatcagctccagccacgagaatgagatggatgaggttattgatgacatc
atcagcatgcagtccagttacgatgatattcaggcatacattgaccctgtccagatgccc
aacacactccctctgtctagcagtcacctggatgtgtacacgggtcctgggatgaagggg
ccagcaattgccatgaccagtaactcctgtcctgccaacctgaccgtcaaacgagaactg
tcagaagcccgagccatggccaaggagagacagaaaaaagacaaccacaatctgattgaa
aggaggaggagatttaacatcaatgatcgtatcaaagagctgggcaccatgatccccaaa
accaatgaccttgtgcatagtgacgtgcgctggaacaaaggcactatattgcgggcatct
gtggagtacatcaaacggatgcagaaggatatgcataggagcagagaggtggaaaacaac
ttcaaaaggatggagatgaccaacaaacaactgttgctacgcatccaggagttggagatg
caggctcacttgcatggcctgcccaacacctctccctctggcctgaacctgtccgacctg
atgtctccctatataaaacaagagctcagcccagaggataagctttctcacccccaaata
caagcccaccaccagcccctgcaccttccccggaaccaggctcagccccagccccaccag
caccacttcctcccgcaaaaccaccttcaacttcagcagggccagcaacagcccaggcag
ctgcagcagctcccccagcatctccagcagcaggcgcccatccagttcccagctgtaggc
agctcccagccctttgactatgcccagtcgctggacttgtgcgatagtatacctggcttc
tcagacggcatatcggggctgggcgacctgggtggactggacgtcgaagggaggagaggc
gagctgggcttcctgatgatggatgagcccctgtccccaatgggtggagacccgctgctc
tctgcgttgtcccctgaggcctcggtcgactccagccgcagatccagcttcagcatagag
gatggagacatactgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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