KEGG   Paralichthys olivaceus (Japanese flounder): 109634915
Entry
109634915         CDS       T06037                                 
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109634915 (polr1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pov03021]
    109634915 (polr1b)
Enzymes [BR:pov01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109634915 (polr1b)
Transcription machinery [BR:pov03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     109634915 (polr1b)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 DUF1186
Other DBs
NCBI-GeneID: 109634915
NCBI-ProteinID: XP_019951325
Position
Unknown
AA seq 1134 aa
MDFSTKWSNLPTGPSLKNLTQGGFGVLKETQHEAVQDLTKAHIESFDQAVTGGLSRVVQA
IPPLEFTVNNDRISLSFVEASINNPVVAKGNVCRDMRVFPAECRGRRCSYKGKLVADVSW
SVNGIPKGIIKQSLGQVPIMVRSKLCNLYGMSPKELVEHHEEAEEMGGYFVVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISIHCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIFQELIKGREDNSFYKSCASEMLRIVMEEGCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLIDECICIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERVAAWLVSVKLAFDKRGSRLSGGWNAENMIKLF
NMGGDVTKPFEYLLATGNLNSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTSSTTTMPALLCSLGVI
PVDGSPGQPFSDCYPVVLDGAVVGWLETELAPVVVDSLRSFKVLRVNKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVRNLALGKEELIGTFEQLYINVGIFEGEIEPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGEDAVVFGTKPGDPKVDGRLDADGLPHIGSTLKYGDPFYSYINLNTGQTFINYY
KSQEASVVDNIKICSNDNGSGNFKRVCITIRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEY
FGKMLQAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLL
EKPPPYWSSMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggacttttctacaaagtggagtaatttacccacaggtccgagtctgaagaacctgacc
cagggcgggttcggtgtcctgaaggagactcagcatgaggcggtccaggacctgacgaaa
gcccacatcgagtctttcgaccaggctgtcaccggcggactgagccgggtcgtacaggcc
atacctcctttggagttcaccgttaataatgacaggatcagcctttcgttcgtcgaggcc
tccatcaacaacccggtggttgccaaagggaacgtctgcagggacatgagggtgtttcct
gcagagtgcaggggaaggagatgctcatacaaaggaaagctggtggctgacgtcagctgg
tcggtcaatggaattcccaaagggatcatcaagcagtccctgggtcaggtgccaatcatg
gtgaggtcaaagctgtgcaacctctatggtatgtctccaaaagagctagttgaacaccat
gaagaagcagaggaaatgggaggttatttcgtcgtgaatggaaatgagaaggtgatccga
atgctgatcatgccgaggaggaactatcctattgccatgtcaagacctaagtggaagagc
aggggccagggctacactcagtatggtatatctatacattgtgtgaaggaagagcacaca
gccatcaacatgaatcttcactatctggaaaacgggactgtgatgctgaacttcatctac
caaaaggagctcttcttcctcccactaggctttgcactcaaggccttggtggacttcaca
gacttccagatcttccaggagctgatcaagggccgtgaggacaactccttctacaagagc
tgtgcctcggaaatgctgcgaatcgtcatggaggagggctgcaccacccgcagcaaggtg
ctcaattacctgggagagcgcttcagggttaagatgaaccttcctgagtggtacacaaac
gagcagtgtgccaacttcctgatagatgagtgcatctgtatccacctgaagtcagatgtg
gagaagttctacctgctctgtctaatgaccaggaagcttttcacatttgccaagcaggag
tgcatggaggagaatcccgacagcatcatgtgtcaggaagtgctcactcctggtcagctc
tacctcatgttcctgaaggagagagttgctgcctggctggtgtctgtgaagctggccttt
gacaagagaggcagccgactgagtggaggatggaacgccgaaaacatgataaagctattc
aacatgggcggtgatgtgaccaaaccttttgaatatctgctggctactgggaacctcaac
tccaagacaggtctcggcatgctgcagaacacaggactgtgtgtcgtagccgacaagctc
aacttcatccgctacctgtcccacttccgctgcgtgcacagaggagcagcgttcgccaag
atgaggaccacctctgttcgtaagctgctgcctgagtcgtggggcttcctgtgtcccgtc
cacaccccggacggagagccttgtggcctcatgaatcacatgacagccagctgcgagatt
gtggcaccaacctcgtccaccacaaccatgcctgctctgctatgttccctcggtgttatt
cccgtggacggatctcctggtcaacctttttcagactgctaccctgtggtgcttgacggg
gccgttgtaggctggttggagactgaattagctccagttgtggttgactcactacgtagt
ttcaaggtactgagagtaaacaagatccctccctggactgagatcgtcctggttcccaaa
acaggcaaggccagcttgtacccaggcctgttcctcttcacaacgccctgtcgtatggtg
cggcccgtacgcaatttagctcttggaaaggaagagttaattggcacctttgaacaactt
tatatcaatgtgggcatctttgagggtgagatcgagcccggtgtgaccacacaccaggaa
ctgttcccacacagtatgctgagcgtggtggccaacttcatcccctactcagatcacaac
cagagtccgaggaacatgtaccagtgtcagatgggtaagcagactatgggattccccctg
cactcgttcacggaccgctcagataacaagctgtaccgactccagaccccacaaagcccg
ctggtcaggccctacatgtacgaccactacaacctggacaactaccccagcggcacaaac
gccattgtggctgtcatatcctacaccggctatgacatggaagatgctatgattgtgaac
aagtcctcgtgggagagaggcttcgcccatggaagcatctataagactgagctggtggat
ctggcggacaaggtgaggggagaggacgccgtggtgtttgggaccaagccaggcgatcct
aaggtggatggaagactggacgctgatggacttcctcacattggatcaactcttaagtat
ggagaccccttctacagctacatcaacctcaacactggtcagaccttcatcaactactac
aagagccaagaagcttctgtagtcgacaatataaagatctgcagcaacgacaacggctca
ggcaatttcaaacgagtttgcatcaccatacgagtgccacgaaaccccaccatcggtgac
aagttcgccagtcgccacggtcagaaaggcatcctgagccgcctgtggccggctgaggac
atgcccttcacagagagcggcatgactcccgacattctcttcaacccccacggcttcccc
tcccgtatgactatcgggatgctcatcgagagcatggccggcaagtccggcgccctgcac
ggcctgagccacgacgccacaccctttactttctctgaggagaactctgctctggagtac
ttcggtaaaatgcttcaggctggaggttacaactattacggcacggagcggctctacagt
ggcctgagcggtcaggagctagaggccgacatcttcatcggggtcgtctactaccagcgg
ctacgtcacatggtctctgacaaatttcaagtgaggaccacgggagcgcgagacaaggtg
accaaccagccggtgggagggaggaacgtccagggaggcattcgttttggagagatggag
cgagacgccctgctggcccacggctcgtccttcctgcttcacgatcggctcttcaactgc
tcggaccgatctgtagcgcaggtgtgcattgactgtggcagcctcctctcccctctgtta
gagaaaccccctccttactggtcgtccatgcgccaccgtaagactgtgtgcaccctgtgt
ggcaaaagtgactctattgactcggtgtctgttccttacgtcttccgctactttgtggcc
gagctcgctgcaatgaacatcaaagtaaaattagatgtaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system