KEGG   Paralichthys olivaceus (Japanese flounder): 109639123
Entry
109639123         CDS       T06037                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:pov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pov03036]
    109639123 (kdm3b)
Enzymes [BR:pov01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     109639123 (kdm3b)
Chromosome and associated proteins [BR:pov03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109639123 (kdm3b)
SSDB
Motif
Pfam: JmjC Cupin_2 PWWP C1_2
Other DBs
NCBI-GeneID: 109639123
NCBI-ProteinID: XP_019958014
Position
Unknown
AA seq 1794 aa
MGDSLELIGKRLLLLLDDGTPASGPEPEQAAWLRGTVRAVSVIGLAAPEVSEAEATTTSS
AAGLTVFVEFENASQRCSWVQVYDEGVKGVLVEDSVVWANRSDGSGTTGAPASSAAWPAL
VFRSLVDRVGLGSLVPVEYFGNKNFEFLPDNKTIQRFEVDKDIRHPLLLEQPSLQAAISS
WRTDFELQEIFRKGSYTIQGRRVLVYQPEFEECWASGLVSQHDPISHIMEITLDKGKENQ
IVDPRVIHVMLAEGELGKNGRRRKDSETIKGDSGRRRRTASEGEDDLNLKRFKGAGDAGA
NAQNCVDSNKTPAEAMGIWVGDSGERVSSTTKNGGSSDGTFAQGRVSSPNTSSPPEMDQS
NATPPRYPAHVKENGRSLTTQGAADSTTTVSHTPTPPPLKPAPSPFSTTSFPSLGQMPSL
VPGAPAPKASPSPQPDREEASQSPFSKTAALVSPGPVTISWSHDSGPSVALSASVGFSSK
APAWGSLTEGSKTAVGFRLPQASPAAPVFGDATSQTNGAPTPTTTPQDTSRPFGFGFGGA
KNETQSQQDQNLFFQCMTQNSGSGQSLTSGQTQSKDTNYFTTVSESLSKEPPSLFKPATS
TEGLKNSNPPKVPETHPTGNGVLNKPSSAFQGVSGSSGGRGSSISIGGLTAAPGAQSASK
KSSNNGTSTGGLGLQSSFTSSDSHQNLFLQASKEPTNPFLAYGDKTSHIPFAGLSGAEPQ
TLGPALDSKPNLFTMAEPPKGILSSSFPSLSAAASPSSSSTQAPASSQKSHSEGALTKEE
QEAAEMPSSTSGCRMFGSIPGGMEEEPVSFEQSQSQKFTLEERGQASKRDSDSSSNSDLS
DLSENEDGPEKGQVPPLPTKDVAMMQKTKVQGASKSRPRNKPFKVGQSVLKDQSKVRRLK
QSGESFLQDGSCINVAPHLHKCRECRLERYRKYRNTDEDSDDDDDPNVACRFFHFRRLAF
TRKGVLRVEGFLSPQQSDSMAMSLWLPAPAVQEGLDLDTSKYILANVGDQFCQLVMSEKE
AMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRRNRPRED
VDEVPEDEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYNIGDMVHSARGKWGIKANCPCT
SRHTKPLVRPFAPNGVSQSTTSSGGGGGSGGLIAAASGIGTTPKSEGEASAIKTETTQTA
APSDSGGGESVGSTSNSTSGTSSPCNLAQSSAKESRSSGEGNSSALHWLADLATQKAKDD
TKESGSLRAMMSRDSRPPFGLDSLSALSKPSASSPKLFNSLLLGSSMAQSKPEGSSLRDL
LNSGPGKLPQGPGESGVPFPSVFTTAGSDKLKSSLPNFLDHIIASVVETKKAEGRRTGAS
EGGELSTMGGRKDGVMGLSVLEPHTSHSWLCDGRLLCLQDPSNGNNWKIFRECWKQGQPV
LVSGIHKRLKSNLWRPEAFSEEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQVIKKRLQD
NEGQPMVLKLKDWPPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLAARLPNFFVRPD
LGPKMYNAYGLISSEDRKVGTTNLHLDVSDAVNVMVYVGIPQGDADQEQEADLSGHKEVM
TTIEEGDVDDMTKRRVYEGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPI
HDQSWYLDQVLRRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSP
EHVRHCFRLTQEFRHLSTTHTNHEDKLQVKNIIYHAVKDAVGTMKAHEPKLARP
NT seq 5385 nt   +upstreamnt  +downstreamnt
atgggggactccctcgaactgatagggaagcgtctgctcttgctcctcgacgacggcacg
cccgcgagtggacccgagccggagcaagctgcctggctccgggggacggtgcgggcggtg
agcgttatcggcctggccgccccggaggttagcgaagcggaggcgacaacaacaagctct
gctgcaggactgacggtattcgtggagtttgagaatgcttcgcagcggtgttcctgggtg
caggtgtatgatgaaggggtgaaaggtgtgttggtagaagactctgtcgtttgggccaat
cggagtgacggcagtgggactactggagccccagcatcatccgctgcctggcctgctctg
gtgttccgctcacttgtggatagagtgggtttaggttcattggttcctgtggagtatttt
ggaaacaagaattttgagttcctccccgataacaaaactatccagaggtttgaggttgat
aaagacataagacaccctttactgttggagcagccctcactgcaggctgccatctccagc
tggcgcactgactttgaactgcaggagatcttcaggaagggttcatacactattcaagga
cgcagggttcttgtgtaccagccagagtttgaggagtgctgggcctcaggacttgtctca
cagcacgaccctatttcacacattatggagattaccttggataagggaaaagagaatcag
attgtagatcctcgtgtgatccatgtcatgctggcagagggggaacttggtaagaatggt
cggcgaaggaaggacagtgaaacaataaagggtgatagtggacgtagacgtaggactgcc
tccgaaggtgaggatgacttgaacttgaaacgttttaaaggagctggcgacgcgggagct
aacgcacaaaactgtgtcgattccaacaaaacccccgcggaagcgatggggatctgggtt
ggggactctggtgaaagagtcagcagcacaaccaaaaacgggggctcttcagacggaacc
ttcgctcagggcagggtgtcatcccccaatacaagttccccacccgagatggaccaatca
aatgctacccctcctcgatatccagcccacgtcaaagaaaacggccgctcactaaccaca
caaggggcagcagactccaccaccactgtttctcacacccccactcctccccccctcaaa
ccagccccctctcccttctccaccacatctttcccttcattaggtcagatgccaagcctg
gtccctggtgctcctgcccccaaggcctccccatccccccagccagaccgagaggaggcc
tcccagtcacccttttccaaaacagctgctcttgtttccccgggccctgtcaccatttct
tggtcacatgacagtggccctagtgtggcactttctgcctctgttggttttagttctaaa
gctcccgcctggggaagcctgactgaggggtcgaaaacggctgtgggttttcgtttgccc
caggcttctccagctgctcctgtatttggagatgctacctctcagaccaatggagctccg
acccctaccacaaccccccaggacacttccagaccctttggttttggctttggtggtgca
aagaatgagactcagtcccagcaagaccaaaacttgtttttccagtgcatgacccagaat
tctggctctggccagagcctaacgtctggtcagacccaatccaaggacaccaattacttc
accacagtgtcggagagcctgagtaaagagcccccaagccttttcaagcctgcaacctcc
accgaagggctgaaaaattccaacccgcccaaagtgcctgagacccatccaacaggaaat
ggtgtactcaacaaaccgtcatcagccttccagggcgtcagcggctcttcaggaggaaga
ggctctagtataagtattggtggtctgacggcagcccctggagcccaaagtgcttctaag
aagagcagtaataatggaacttccacggggggtttaggcctgcagtccagttttacttct
tctgatagccaccagaacctttttctgcaagcctccaaagagcccaccaatccattcctg
gcatatggagacaaaacctcccacataccttttgctggactcagtggggctgagccccag
accctgggtcctgccttggacagcaagccgaacctgttcactatggcagagccacctaag
gggattctgtcttcctctttcccatcactctcggcagctgcttcacccagctcttcctcc
actcaagcgccagcctcatctcagaagtcacatagtgaaggggctttgaccaaggaggag
caagaggctgcggagatgccttcatccacctcaggctgccgaatgtttggaagcatcccc
ggtggaatggaagaagagcctgtgtcgtttgaacagagccagtctcagaagtttaccctg
gaggaaagaggccaagcatcgaaacgtgactctgattccagcagcaacagtgacctgtca
gatctgagtgagaatgaggatggcccagagaaaggccaagtcccaccactccccaccaag
gatgttgccatgatgcagaaaactaaagtccaaggggcttctaagagccgtccacgtaac
aagcctttcaaagtgggccagtctgtgttaaaagaccagagtaaggtgcgtcgcctgaag
cagtctggtgagtcctttctccaggatggttcgtgcatcaatgtagcccctcacttgcac
aaatgccgtgagtgccgcctggagcgttaccgtaaatatcggaatacggatgaagatagc
gatgatgatgatgacccaaatgtagcttgtcgtttcttccacttcagaaggttggctttc
actcgtaaaggtgtgctgcgcgtggaaggcttcctgagccctcagcagagtgattccatg
gctatgagtttgtggctacctgcaccagctgttcaagagggactggaccttgatacctcc
aagtacatcctggcaaatgtgggagaccagttctgccagttggtcatgtctgagaaggag
gcgatgatgatggtggaacctcaccagaaagtggcatggaaacgagctgtgcgaggcgtc
agagaaatgtgtgatgtgtgtgagaccaccctctttaacatccactgggtgtgccgcaag
tgtggctttggagtttgtctggactgctatcggcttcgcaggaacaggccaagggaggat
gtggatgaagttccagaggacgaggttttctcttggttgaaatgtgctaaaggtcaacct
catgagccacagaacctcatgcctacgcagattatacctgggacagctctgtacaacata
ggggacatggtgcattcagcaagaggcaagtggggtattaaggccaattgtccatgtacc
agtcgacacaccaagcctcttgtgcgcccttttgctcccaatggggtttcacagtctaca
acgagtagtggtggtggcggcggcagcggcggccttatagctgcagcttctggtattggc
accactccaaaatcagagggagaagcgtcagcgatcaaaacagaaactacacaaacagca
gcaccatcagacagtgggggtggggaaagtgtgggcagtactagtaactccaccagtggt
acatcctccccctgtaacctcgcacagtcctctgccaaggagtcacgctcatcgggagag
ggcaacagctctgctctgcactggctggcagacttggccacacagaaagccaaggatgac
accaaggaatctggttcacttcgggccatgatgagtcgagacagccggcctccctttggt
ttggactcactcagtgccctgtcaaagccatctgcttctagccctaagctatttaacagc
ctgctactgggctcaagcatggcccagtccaaacctgaggggtccagtctacgagatctg
ctcaactctggaccaggaaaactcccccagggtcctggagagagtggcgtaccattcccc
tccgtctttaccacagcaggcagtgacaagctgaagagcagcctcccaaacttcctcgat
cacatcattgcctcggttgtggagaccaaaaaggcagaaggccgtcgcactggggcctct
gaaggtggcgagctttctacgatggggggccgcaaagatggtgtaatgggccttagtgtt
ttagaaccacatacctcgcactcctggctctgcgatggacgactcctctgcctacaagat
cctagcaacggcaacaactggaagatcttcagagagtgctggaagcagggacaacctgtg
ttggtgtcagggatacataaacgtctgaagtctaatttgtggcgacctgaagccttcagt
gaggagtttggagatcaggatgtagacctggtcaactgtagaaattgtgccatcatctct
gatgtgaaggtgcgagacttctgggatggtttccaggtcatcaaaaagcgactgcaagat
aatgaaggtcaacccatggtgttgaagttaaaggactggcctccaggtgaagactttagg
gacatgatgcccacaaggtttgatgatctgatggataacctccccttgcctgagtacaca
aaaagagacggtcgtctaaaccttgctgcccgtctgcccaacttttttgtgcggcctgac
ctcgggcctaagatgtacaacgcctatggcttaatctccagtgaagacagaaaggtggga
accactaaccttcatctggatgtatctgatgctgtcaacgtcatggtgtatgttggcatc
cctcaaggagatgctgaccaggagcaagaggcagatctgtctggacacaaagaggtcatg
accaccatcgaggagggtgatgtggatgacatgacgaagcggagggtgtacgaggggaaa
gagaaacctggagcgctctggcacatctacgctgccaaagatgctgaaaagatcagagaa
ctgctccgcaaggtgggagaggagcagggtcaagaaaaccctccagatcatgaccccatt
cacgaccagagctggtacctggaccaggtcctccgccgcaggctctatgaagaatatggc
gtccagggctgggccattgtacagttcttaggagatgctgtattcattcctgctggagca
ccacaccaggtgcacaacctgtacagctgtatcaaggtggctgaggactttgtttctcct
gagcatgtgaggcactgtttcagactgacccaggagttcagacacctgtccactactcat
acaaaccacgaagacaagctacaggtgaagaacatcatctatcacgcagtgaaggacgct
gttgggactatgaaggcccatgaacctaaactagcccgcccttag

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